Gene Information

Name : ZPR_2592 (ZPR_2592)
Accession : YP_003585111.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : ClpA/ClpB family chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2792660 - 2795248 bp
Length : 2589 bp
Strand : -
Note : -

DNA sequence :
ATGGATGATAATTTTTCACCTAGGGTAAAGGATGTAATAGCGTATAGTAAAGAAGAGGCTTTAAGATTAGGTCATGACTT
TATCGGTACGGAACATTTGATGCTTGGATTATTAAGAGACGGTGACGGGAAAGCCATAGACATCCTAAACGCTCTGGATA
TCGATTTAAGCCATTTAAGAAGAAAAGTAGAGATTTTAAGTCCTGCTAATCCAAATATGACAGCGGTTTCGAATGAGAAA
AAGAACCTGCATTTAACAAGACAGGCGGAACGTGCCCTTAAGACCACGTTTTTGGAAGCTAAGTTATTTCAGAGTCCAAA
TATCAATACGGCGCACCTGTTATTGTGTATTTTAAGGAATGAAAACGATCCCACCACAAAATTGCTTAACAAGCTTAAGA
TTGATTATGATGGGGTAAAAGATCAATTTAAATTTATGATCGCAAACGACGATACAGATTATACTCAGGGTCCTTCAGCA
GATTCATTTTCTGATGAAGATGGTACAGATGATGCCACTAAAGATAATCCTTTTAGTGGATCAGGTGCTACTGGTAGTGG
CGCAGCCGCAGGTAAATCAAATAAGAAATCCAAAACGCCGGTTTTAGATAATTTCGGTCGTGATTTAACCGCAATGGCAG
AAGCCGATAAACTTGATCCTGTAGTAGGCAGAGAAAAGGAAATCGAACGTGTGTCTCAAATTCTTAGTAGGCGTAAGAAA
AACAACCCTTTATTAATAGGAGAACCGGGAGTTGGTAAATCTGCAATCGCAGAAGGTCTTGCTTTAAGGATCGTAAAACG
CAAAGTTTCAAGAATTTTATTTGATAAACGTGTTGTTACCTTAGATTTGGCAAGTTTAGTGGCCGGTACAAAATATCGTG
GGCAATTTGAAGAGCGCATGAAGGCGGTGATGAACGAGCTTGAAAAGAATGATGATATTATTCTTTTTATTGATGAAATT
CATACTATTGTAGGTGCAGGTGGTGCTACCGGAAGTTTAGATGCCAGTAACATGTTTAAGCCTGCATTGGCGCGGGGTGA
AATTCAATGTATTGGTGCTACAACTTTAGATGAATATCGCCAGTATATCGAAAAAGATGGAGCTTTAGAGCGACGTTTTC
AAAAGGTTATTGTCGAGCCGACTTCAGTTGAAGAAACCATCGAGATCCTTAATAATATTAAAGATAAGTACGAAGATCAT
CATAACGTGGAATATACTCCTGAGGCTATCGAAGCTTGTGTGAAGTTAACTAATCGTTATATGACCGATCGATTCCTTCC
TGATAAGGCTATTGATGCGTTAGATGAAGCCGGATCCCGTGTACATATTACCAATATTGATGTTCCTAAGCAAATTCTTG
ATCTGGAGCGTAAATTAGAAGAAGTTCGCGAGAAAAAAAATACGGTCGTTAAAAAGCAGAAATACGAAGAAGCTGCTAAA
TTAAGGGATGATGAAAAAAATCTTGAAAAAGAATTAGCAATCGCTCAGGAACGTTGGGAAGAAGAATCAAAAAAACATAA
AGAAATCGTAAGCGAAGATAGCGTTGCTGATGTTGTTTCTATGATGACTGGCGTTCCGGTAAATCGTATAGCCCAGACTG
AATCGAATAAACTGGTAGAACTTCCTAATAAGATAAAAGGAAAAGTTATTGGCCAGGATGATGCCGTAGCCAAGGTGGTA
AAAGCCATTCAGCGTAACCGTGCAGGATTAAAAGATCCCAATAAACCAATTGGTTCTTTTATTTTCTTAGGTCAAACCGG
TGTAGGTAAAACGCAATTGGCTAAAGTACTGGCTCGTCAGCTTTTTGATAATGAGGATACATTAATAAGAATCGATATGA
GCGAGTATATGGAAAAATTCGCTGTATCCAGATTAATTGGTGCACCTCCGGGGTATGTAGGCTATGAAGAAGGTGGCCAG
CTTACCGAAAAAGTAAGAAGAAAGCCTTACGCTGTTATTCTCTTAGACGAGGTAGAGAAAGCACATCCAGATGTTTTCAA
TATGCTGTTACAGGTATTAGATGACGGATATTTAACCGATAGTCTTGGTCGCAAAATCGACTTTAGGAATACGATTATTA
TCATGACTTCTAATATTGGAGCTAGAAAACTTAAGGACTTTGGTCAGGGTATTGGTTTTGGTACACAATCCCAAAGAGCA
CAGGCCGATGAAAATACTCGAGGAGTCATTCAAAATGCCCTTAAAAAAGCATTCGCTCCAGAGTTCCTGAATCGGATTGA
CGATGTAATAGTGTTCAACGCTTTAGAAAGAGAAGATATTCATAAAATCATTGATATCGAACTTTCTAAATTATATGGCC
GAATTGGTGGTCTTGGATATCATTTAGAATTAAGTGATAAAGCCAAGGATTTCATTGCTGAAAAAGGTTTTGATAAACAA
TACGGAGCTAGACCTTTAAACCGTGCTATTCAGAAATATATTGAAGATGCGCTGGCGGAAGAGATCATTAATTCTAAGAT
CGCTGAAGGTGATAAGATTGAAATGGATTATAAGAAAGGTGAAGACGAATTGGTTATAAAAGTTAAAAAAGGAAAAAATA
CCGAAGAAGAATCTGAATCCAAAAAATAA

Protein sequence :
MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGDGKAIDILNALDIDLSHLRRKVEILSPANPNMTAVSNEK
KNLHLTRQAERALKTTFLEAKLFQSPNINTAHLLLCILRNENDPTTKLLNKLKIDYDGVKDQFKFMIANDDTDYTQGPSA
DSFSDEDGTDDATKDNPFSGSGATGSGAAAGKSNKKSKTPVLDNFGRDLTAMAEADKLDPVVGREKEIERVSQILSRRKK
NNPLLIGEPGVGKSAIAEGLALRIVKRKVSRILFDKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDIILFIDEI
HTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTSVEETIEILNNIKDKYEDH
HNVEYTPEAIEACVKLTNRYMTDRFLPDKAIDALDEAGSRVHITNIDVPKQILDLERKLEEVREKKNTVVKKQKYEEAAK
LRDDEKNLEKELAIAQERWEEESKKHKEIVSEDSVADVVSMMTGVPVNRIAQTESNKLVELPNKIKGKVIGQDDAVAKVV
KAIQRNRAGLKDPNKPIGSFIFLGQTGVGKTQLAKVLARQLFDNEDTLIRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQ
LTEKVRRKPYAVILLDEVEKAHPDVFNMLLQVLDDGYLTDSLGRKIDFRNTIIIMTSNIGARKLKDFGQGIGFGTQSQRA
QADENTRGVIQNALKKAFAPEFLNRIDDVIVFNALEREDIHKIIDIELSKLYGRIGGLGYHLELSDKAKDFIAEKGFDKQ
YGARPLNRAIQKYIEDALAEEIINSKIAEGDKIEMDYKKGEDELVIKVKKGKNTEEESESKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-177 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_2592 YP_003585111.1 ClpA/ClpB family chaperone VFG0079 Protein 0.0 49
ZPR_2592 YP_003585111.1 ClpA/ClpB family chaperone VFG0080 Protein 2e-151 48