Gene Information

Name : ZPR_2256 (ZPR_2256)
Accession : YP_003584776.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : VipB-like polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 2411395 - 2412396 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence : 
TTGATAGATGCAAATAAACGGGCAAAACTAACCGGCAGTACAGTACTTGTTACCGGAGGAGCCGGTTTTATTGGTTCTAA
TCTTTGTAAAAGCCTTCTTGATCTTAATGCAAGGGTGATTTGCCTGGATAATTTTTCTACCGGGAAAAAAGCAAATTTAA
ATTTATTTAAGGATCACCAAAATTTTGCTTTAATCGAAGCCGATATCCGCGATGCTGATGCTTGTCTAAGAGCCTGTAAA
AATGTAGATTATATTTTACATCAGGCTGCATTAGGATCGGTACCACGTTCGATTAAGGATCCGCAAACTACAAATGCAGT
AAATATAAACGGCTTTTTAAATATGCTGGTTGCCGCGAAGGAAAACCAGGTAAAAAGATTTATATATGCTGCGAGCTCTT
CAACTTATGGAGATGCCGCAGCATTGCCTAAAGTAGAAGATCATATAGGGAAACCATTGTCTCCTTATGCTATCACAAAA
TATGTAAATGAACTTTACGCCGATGTTTTTCAGAAAACCTACGGCTTAAATAGCATAGGCTTACGCTATTTTAATGTATT
TGGGCGCCATCAGGATCCCGATGGCGCTTATGCAGCGGTCATCCCAAAGTTTGTTAAAAAACTAATGAATCATCGATCGC
CGGTTATTAATGGCGATGGTAGTTTTTCACGAGACTTTACCTATATCGATAATGTGATTCAGGCAAATTTACTGGCCATG
CTCACCGAAACCCCGGAAGCCGTAAATCAAATTTATAATATAGCTTGCGGCGAAAGAACAGATCTTAACCAACTTGTTGA
AATATTAAAGGCTGAATTATATAAATTTGATCCTGAAATTTTAGATATTTCGGCTAAATACGGTCCTGCACGCCAGGGTG
ATGTGCCCCATTCCCAGGCATCGATCGAAAAAGCTAAGAAATTACTTGAGTATCAGCCGGAATTTTCAGTTAAAGCAGGT
TTAGCTGAAGCCGTGTCCTGGTATTGGAATAATTTAAAGTAA

Protein sequence : 
MIDANKRAKLTGSTVLVTGGAGFIGSNLCKSLLDLNARVICLDNFSTGKKANLNLFKDHQNFALIEADIRDADACLRACK
NVDYILHQAALGSVPRSIKDPQTTNAVNINGFLNMLVAAKENQVKRFIYAASSSTYGDAAALPKVEDHIGKPLSPYAITK
YVNELYADVFQKTYGLNSIGLRYFNVFGRHQDPDGAYAAVIPKFVKKLMNHRSPVINGDGSFSRDFTYIDNVIQANLLAM
LTETPEAVNQIYNIACGERTDLNQLVEILKAELYKFDPEILDISAKYGPARQGDVPHSQASIEKAKKLLEYQPEFSVKAG
LAEAVSWYWNNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-81 56
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-81 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_2256 YP_003584776.1 VipB-like polysaccharide biosynthesis protein VFG0430 Protein 5e-82 56