Gene Information

Name : ZPR_1917 (ZPR_1917)
Accession : YP_003584438.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator winged helix family protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2057003 - 2057671 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAATTCTAATAGTAGAGGACGAAACAGGTATTTCTGGATTTCTAAAGCAGGGCTTAGAAGAAGAATCTTTTGCCGT
AGATATTGCTGATAATGGCAAAAAAGGGCTAGAATTGGCGCTTACCGGAAAGTACGATCTCTTGCTGTTAGATTGGATGC
TTCCTGGCTTAAGCGGTATAGAAATATGCCGGCAATTTAGAAAAGAAGATAAAGAAACCCCTGTACTTTTTTTGACGGCT
AAGGACACCGTAGACGAAACCATATTTGGTTTACAAAGTGGAGCGAACGATTATATAAAAAAACCTTTCCATTTTGAAGA
ATTACTAGAAAGAATTAAGGTGCAACTGCGCCCTAAATCAGGAGAGCACGCTATCTTTTCTTTAGGACCGATAGAATTGA
ATACAGGTACTCATCAGGCATTTAAAAACGGAAAAGAAGTTAATCTTACCCTTAAGGAATTTGCATTGCTGGAATACTTA
ATTCGTAATAAAGAAAGGGTATGTACACGTACCAAGATTATAGAAAAAGTTTGGGATATCAATTTTAGCTATAACACTGG
TGTAATAGATGTGTACATTAATGCATTACGTCGTAAACTAGATTTGGATCAAGATGAAAATTATATTCAAACAGTTAGGG
GAGTTGGCTACATTGCTAAAGAATCATGA

Protein sequence : 
MRILIVEDETGISGFLKQGLEEESFAVDIADNGKKGLELALTGKYDLLLLDWMLPGLSGIEICRQFRKEDKETPVLFLTA
KDTVDETIFGLQSGANDYIKKPFHFEELLERIKVQLRPKSGEHAIFSLGPIELNTGTHQAFKNGKEVNLTLKEFALLEYL
IRNKERVCTRTKIIEKVWDINFSYNTGVIDVYINALRRKLDLDQDENYIQTVRGVGYIAKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0111 Protein 3e-38 44
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0308 Protein 8e-35 44
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0638 Protein 2e-31 44
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_007622.3794948.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_003923.1003417.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_013450.8614146.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_002951.3238224.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_007793.3914065.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_002758.1121390.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_010079.5776364.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein NC_002952.2859858.p0 Protein 2e-32 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein AE015929.1.gene1106. Protein 6e-30 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0125 Protein 6e-36 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0083 Protein 3e-35 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0197 Protein 3e-34 43
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein BAC0347 Protein 1e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_1917 YP_003584438.1 two component transcriptional regulator winged helix family protein VFG0596 Protein 5e-34 42