Gene Information

Name : ZPR_1215 (ZPR_1215)
Accession : YP_003583750.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1327014 - 1329620 bp
Length : 2607 bp
Strand : -
Note : -

DNA sequence :
ATGAACTTTAATAATTTCACCATAAAATCACAGGAGGCGATCCAGCAGGCACAACAGCTTGCTCAGGAGATGGGCCATCA
GCAAATTGAAAACGAACATTTGTTCAAAGCGATTACTACGGTAGACGAAAATGTAACGCCATTTTTGCTAAAAAAACTGA
ACATTAACGTTAATCTTTTTAATCAAATTCTGGACAATACCCTTCAGAGTTTCCCTAAAGTTAGCGGCGGCGATATCATC
TTGAGTCGGGAAGCCGGTAAAACGGTAAACGAAGCATCGGGTATTGCTAAGAAAATGAACGATGAATATGTTTCTATTGA
ACATTTAATATTAGCGATATTTAAGTCTTCAAGTAAAGTAGCGCAAATATTAAAAGATCAGGGTGCTACAGAAAAAGGCT
TAAAAGCAGCCATCGAAGAATTAAGAAAAGGAGATCGCGTAACTTCACAAAGCGCTGAAGAAACCTACAATTCCTTAAAC
AAATATGCAAAAAACCTTAACCATCTAGCCGAAACCGGAAAACTGGATCCGGTGATTGGCAGGGATGAAGAAATACGCCG
AATTTTACAAATCTTATCCCGAAGAACCAAAAATAATCCCATGTTGGTAGGTGAACCGGGGACCGGTAAAACGGCGATTG
CTGAAGGTTTAGCACACCGAATTGTAGCTGGTGACGTACCAGAAAACTTAAAAGAAAAACAAATATTTTCTTTAGATATG
GGGGCATTAATTGCCGGAGCTAAATTTAAAGGAGAATTTGAAGAAAGATTAAAAGCGGTAATAAAAGAGGTAACCGGTAG
CGATGGTAATATCGTATTATTTATTGACGAGATCCACACGCTTGTTGGGGCCGGTGGTGGCCAGGGGGCTATGGATGCTG
CAAATATTCTAAAACCTGCTTTAGCTCGTGGAGAACTAAGAGCCATTGGAGCTACCACTTTAGATGAATATCAGAAGTAT
TTTGAAAAAGATAAAGCTTTAGAGCGACGTTTTCAGAAAGTGATGGTAGAAGAACCAGATACCGAAAGTGCAATCTCCAT
TCTTAGAGGTATTAAAGATAAATACGAGCAACATCATAAAGTAAGGATTAAAGATGAGGCAATTATTGCCGCGGTAGAAT
TATCGCAACGTTATATTACCAACCGTTTTTTACCTGATAAGGCCATCGACCTAATGGATGAAGCGGCATCTAAACTTCGT
ATGGAAATTAACTCTAAACCGGAAGAGTTAGATGTGCTGGACCGTAAGATCATGCAACTTGAAATTGAGATCGAAGCTAT
TAAGCGCGAAAAAGATGAAGCGAAATTAAAATCTTTACGGGCAGATTTAGCGAATCTTAAAGAAGAACGTAATGAAATCC
ACGCACAATGGAAAAACGAAAAAGAAGTTGTCGATAATATCCAGGGTGCGAAAGCTGAAATCGAGGAATATAAGCTGGAA
GCCGAACGAGCCGAACGTGAAGGCGACTATGGGAAAGTAGCCGAATTACGTTATGGTAAAATAAAAGAAGCTCAGGAAAA
ACTGGAACGTCTTCAAAAAGAAGTTAAGGAAAGAGAAAGCGGGAAGTCTTTAATTCAGGAGGAAGTTACCAATGATGATA
TCGCTGAAGTAGTTGCGAAATGGACGGGGATTCCGGTAACTAAAATGCTGCAAAGCGAGCGGGAGAAATTGCTTCGATTA
GAAGAAGAACTGCACCGCCGTGTAGTAGGACAGGAAGAAGCAATCGTGGCGGTAAGCGATGCTGTGCGTAGAAGCCGCGC
CGGATTACAGGATCAAAATCGACCCATTGGATCTTTCTTATTCCTGGGAACCACAGGTGTGGGTAAAACCGAATTAGCGA
AAGCACTGGCCGAATATTTATTCGATGATGAATCGGCAATGACCAGAATCGACATGAGTGAATACCAGGAGCGCCACTCG
GTAAGCCGATTAGTAGGTGCACCTCCGGGATACGTTGGCTATGATGAAGGCGGACAGTTAACCGAAGCGGTGAGACGTAA
ACCTTATTCAGTGGTACTTTTGGATGAGATCGAAAAAGCGCATCCAGACACTTTCAATATCCTTTTACAGGTATTGGATG
AAGGCCGACTAACAGACAATAAAGGACGCCTGGCTGATTTTAAGAATACAATCATCATTATGACTTCTAATATGGGAAGC
CAGATTATCCAGGATAAATTTGAGGCTATTCAGGATATTGAAACAGCGATGGAAGCAGCCAAAACTGAAGTACTTGCTTT
ACTAAAACAAAGTGTACGACCAGAATTTATAAACCGTATCGATGACATTGTGATGTTCTCACCTTTAACCCAGAAAGACA
TTAAACGAATTGTCGATCTGCAATTAAAGGGAGTAAAGAAAATGCTAGCCAAACAGAATATTGTTTTAGATGCTACAGAG
CAGGCACTGGCATTCTTAGCTAAACGCGGTTTCGACCCACAATTTGGTGCAAGACCGGTAAAGAGAACGGTACAAAAAGA
AGTATTGAATAAACTATCGAAAGAAATCCTTTCTGGTCATATTCATACCGATAGTATCATCCTGTTAGATGAATTTGATG
ACCACTTGGTATTTAGAAATCAGGAAGAATTGAAAGCATCTGAATAA

Protein sequence :
MNFNNFTIKSQEAIQQAQQLAQEMGHQQIENEHLFKAITTVDENVTPFLLKKLNINVNLFNQILDNTLQSFPKVSGGDII
LSREAGKTVNEASGIAKKMNDEYVSIEHLILAIFKSSSKVAQILKDQGATEKGLKAAIEELRKGDRVTSQSAEETYNSLN
KYAKNLNHLAETGKLDPVIGRDEEIRRILQILSRRTKNNPMLVGEPGTGKTAIAEGLAHRIVAGDVPENLKEKQIFSLDM
GALIAGAKFKGEFEERLKAVIKEVTGSDGNIVLFIDEIHTLVGAGGGQGAMDAANILKPALARGELRAIGATTLDEYQKY
FEKDKALERRFQKVMVEEPDTESAISILRGIKDKYEQHHKVRIKDEAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLR
MEINSKPEELDVLDRKIMQLEIEIEAIKREKDEAKLKSLRADLANLKEERNEIHAQWKNEKEVVDNIQGAKAEIEEYKLE
AERAEREGDYGKVAELRYGKIKEAQEKLERLQKEVKERESGKSLIQEEVTNDDIAEVVAKWTGIPVTKMLQSEREKLLRL
EEELHRRVVGQEEAIVAVSDAVRRSRAGLQDQNRPIGSFLFLGTTGVGKTELAKALAEYLFDDESAMTRIDMSEYQERHS
VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS
QIIQDKFEAIQDIETAMEAAKTEVLALLKQSVRPEFINRIDDIVMFSPLTQKDIKRIVDLQLKGVKKMLAKQNIVLDATE
QALAFLAKRGFDPQFGARPVKRTVQKEVLNKLSKEILSGHIHTDSIILLDEFDDHLVFRNQEELKASE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_1215 YP_003583750.1 chaperone ClpB VFG2076 Protein 3e-120 44
ZPR_1215 YP_003583750.1 chaperone ClpB VFG2084 Protein 3e-105 41