Gene Information

Name : HMPREF0675_3921 (HMPREF0675_3921)
Accession : YP_003581089.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 946176 - 946928 bp
Length : 753 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGACCCGGCTTAGAGAGGAACCACCAGTGCCGACTCTAGAGGTCAAAGAACTACACCATCGATTCGAAAAGGGTCCCGA
AGTGCTCCGGGGTGTCAGCGTCACGTTCCAGTCGGGAACGATGACAGCAATCATGGGACCCTCGGGCTCGGGCAAGTCAA
CCCTTCTGAACTGCATATCGGGACTGGTCAGACCCAAAACAGGCAAAGTTCTCTACAACGGCGCAGATCTGACAGGGTTC
AGCCAGAGCGACCTGGACAAGCTACACCGCAGATCGTGGGGGTTCATTTTCCAGTCCTACAACCTCGTTGACGCCTTGAC
ATCTGCCGATAACGTCAAGCTACCGGCCTTGTTCGACCGCAAACGCATGGACAATGCAACCGTCGAAGCTGCGCTCGGAC
GCGTGGGAATGGCTGGATTCGCTCACCGATATCCAGATCAGCTATCAGGCGGGCAACGACAGCGTGTCGCCATCGCGCGT
GCCATTGCTTCGACCCGGGAGGTCGTCTTCGCCGACGAACCCACCGGAGCGCTCGACAGTGAGTCTCGCCGCGAGGTAAT
GACTCATCTGGAGGCTCTTTCCCAGGCTGGATCAACTGTGATCATCGTGACTCACGACCCCGTCGTCGCCGCTTCGGCTT
CTCGTGTGTTGTTTCTCTTCGACGGCCAGATCGCCGACGACAGCACCGGCATGGACGCCGTGGCAATCTCCAGTCGCATC
GCTGCTTTGGAGGCACAGGCGTGCGGGAGCTGA

Protein sequence : 
MTRLREEPPVPTLEVKELHHRFEKGPEVLRGVSVTFQSGTMTAIMGPSGSGKSTLLNCISGLVRPKTGKVLYNGADLTGF
SQSDLDKLHRRSWGFIFQSYNLVDALTSADNVKLPALFDRKRMDNATVEAALGRVGMAGFAHRYPDQLSGGQRQRVAIAR
AIASTREVVFADEPTGALDSESRREVMTHLEALSQAGSTVIIVTHDPVVAASASRVLFLFDGQIADDSTGMDAVAISSRI
AALEAQACGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0675_3921 YP_003581089.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 2e-23 45