Gene Information

Name : glnA (HMPREF0675_3740)
Accession : YP_003580909.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 756685 - 758172 bp
Length : 1488 bp
Strand : -
Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653

DNA sequence :
GTGACGGTCGAGCAACTCATACGAACTACCGTAAAGCACATCACCAGTCATGTTGATGGAGGAAAGATGTTCGAAGGTCC
CGACGACCTGCTTGCCTATGTCAAGAAGGAGGGCATCGAGATGATCGATGTCCGCTTCTGTGACCTTATCGGTATCATGC
AGCACTTCACCGTTCCCGCCCGAGAGTTCGACAAGGACCAGTACGAGAACGGTCTGGCCTTCGACGGATCCTCTATTCGG
GGTTTCCAGAAGATTAACGAGTCGGACATGGCCCTACTACCCGATCCGACGACCGCCTGGATCGACCCCTTCCGCGAGCG
CAAAACCCTTATCGTGAATTTCAACGTCCATGACCCCATTACGAAGGAGGCCTACAGCCGCGATCCGCGCAACATCGCGC
ATAAGGCCGAGGCTTACCTCGCATCTACTGGGATCGGCGATACTGCCTTCTTCGCTCCTGAAGCTGAGTTTTACGTCTTC
GACGACATTCGCTTCGACACCCGTCAGAACACCTCGTACTACTCCATCGACTCCGAGGCTGGAGCGTGGAACACTGGACG
TACCGAGGATGGCGGCAACCGCGGATACAAGGTGAAATACAAGGGCGGATATTTTCCGGTCGCCCCGACCGACCATTTTG
GTGATCTGCGTGACGAAATCGTCACCATCATGGAGCGCCTTGGCATGAAGGTCGAGCGCGCCCACCATGAGGTGGGCACA
GCAGGTCAAGCCGAGATCAATTGGCGTTTCGACACCCTGTCGCGCAGCGCTGACGATGTCATGAAGTTTAAGTACATCGT
CAAGAACGTCGCCTGGCAGCACGGCAAGACGGCCACTTTCATGCCGAAGCCGATCTTCGGAGACAACGGCTCGGGCATGC
ATGTTCACTCTTCGATCTGGAAGGGCGGCGAACCTCTGTTCTTTGACGAGTCCGGATACGCCCAACTCTCTGACATGGCC
CGCTACTACATCGGCGGCATCCTCAAGCACGCACCGTCGCTGCTGGCCTTCACTAACCCCTCGGCCAACTCGTACCACCG
TCTGGTGCCGGGCTTCGAGGCCCCAGTCAATCTGGTGTATTCACAGCGCAACCGCTCCGCCTGCATGCGTATCCCGATCA
CCGGCCCAAATCCGAAGGCCAAGCGCGTCGAATTCCGTTGCCCAGATCCGTCTGCCAACCCTTACATGGCCTTTGCCGCC
CTGCTACTGGCCGGCCTGGACGGCATCCAGAACAAGATCGAGCCGCCCGCGCCGGTCGACAAGGACATCTACGAGCTCCC
TCCTGAGGAGCATGCCGCCATGGATCACGTGCCGGGCAACCTGGGTGCGGTCCTCGACAATCTCGAGGCCGACCACGAGT
TTCTCCTTGCCGGTGACGTGTTCACCCCGGATCTCATCGAGACCTGGGTCGAACTCAAGCGTGGCGACCTGGCTGCCCTG
CAGCAACGTCCGCACCCCTACGAGTTCGACCTGTACTACGACATCTGA

Protein sequence :
MTVEQLIRTTVKHITSHVDGGKMFEGPDDLLAYVKKEGIEMIDVRFCDLIGIMQHFTVPAREFDKDQYENGLAFDGSSIR
GFQKINESDMALLPDPTTAWIDPFRERKTLIVNFNVHDPITKEAYSRDPRNIAHKAEAYLASTGIGDTAFFAPEAEFYVF
DDIRFDTRQNTSYYSIDSEAGAWNTGRTEDGGNRGYKVKYKGGYFPVAPTDHFGDLRDEIVTIMERLGMKVERAHHEVGT
AGQAEINWRFDTLSRSADDVMKFKYIVKNVAWQHGKTATFMPKPIFGDNGSGMHVHSSIWKGGEPLFFDESGYAQLSDMA
RYYIGGILKHAPSLLAFTNPSANSYHRLVPGFEAPVNLVYSQRNRSACMRIPITGPNPKAKRVEFRCPDPSANPYMAFAA
LLLAGLDGIQNKIEPPAPVDKDIYELPPEEHAAMDHVPGNLGAVLDNLEADHEFLLAGDVFTPDLIETWVELKRGDLAAL
QQRPHPYEFDLYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-84 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003580909.1 glutamine synthetase, type I VFG1399 Protein 1e-153 66