|
Name : HMPREF0675_3724 (HMPREF0675_3724) Accession : YP_003580893.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Virulence Product : iron chelate uptake ABC transporter, FeCT family, permease protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 739404 - 740438 bp Length : 1035 bp Strand : + Note : identified by match to protein family HMM PF01032 DNA sequence : GTGAGCCGCTGGCGCAGTTGGCTCCTGCTCGGCATTGTCGTTGCTGCCCTGATCGGCAGTGCCCTCGTAGTCCTGGGGAT CGGGGCAGTTCGGGTTCCGGTTTCCGATGTGGCGCGGGTGGTGGCGCGACGCTTTCGGCTCATTGAAGGAGCCGACGTGA CGGTCCTCAACGACCAGATCGTATGGCAAATGAGGGCCCCGCGTGTCATCGGATCGATGGCCGTCGGTGCTTTGTTGGCG ATGTGCGGCGCGGTGTTGCAGACCTTGACCGGCAACGATCTGGCTGATCCGTACCTACTAGGTATCTCCAGCGGGGCGTC GGTCGGGGCGGTCTTCGTCCTGATCGTCGGGATTTCCAGCACCCTCGGGCAGTCGGTCCTTATGACCCTGGCCTCCTTCA TTGGAGCCGTCGTAGCCTTGGTCATGGTGCTGACGATGGCCACGGGCAGATCAGGGGAATTGCCTGCCGGCCGAACAATC TTGGCCGGTGTGGCCGTGGGCCAGTTGTGCGGAGCAGCGGTGTCGGTGATGATCATGATCTTCGGGGAGTCGAATGCGGC CCGTTCAGCTCTGTCATGGACCCTTGGGTCCTTCGCCGGGCTGAGGTGGGGATCGACGATCACGCTGGTTGTTGCCACCG TGCCGGCGCTGGTCGTCGGGATGGCTTTGTGCCACATCCTTGACGCCTTCGCATTTGGAGACATCAGTGCGATGTCGTTG GGTGTTCCGGTGAACACTGTCCGCTGGGCAATCATGGTCAGCACGGCTCTGCTGACGGCCCTCAGCGTGGCGTTCGCTGG ACCCATCGGCTTCGTCGGGCTCACGGTTCCCCATATCGTGAGATTCTGGACTGGGTCGCGTCACGCTCGTCTTCTGCCGA TATCTGCCCTGGCCGGAGCGCTGCTCATGGTGTGGTCAGACACCGCTGCACGATGTTTACGTCCCGATACCGAAATCCCC GTGGGCGTCATCACCGCGATCGTCGGGGCCCCGGTGCTAGTCGTGCTTTTGCGTCGACAGGCCTCGAGATCATGA Protein sequence : MSRWRSWLLLGIVVAALIGSALVVLGIGAVRVPVSDVARVVARRFRLIEGADVTVLNDQIVWQMRAPRVIGSMAVGALLA MCGAVLQTLTGNDLADPYLLGISSGASVGAVFVLIVGISSTLGQSVLMTLASFIGAVVALVMVLTMATGRSGELPAGRTI LAGVAVGQLCGAAVSVMIMIFGESNAARSALSWTLGSFAGLRWGSTITLVVATVPALVVGMALCHILDAFAFGDISAMSL GVPVNTVRWAIMVSTALLTALSVAFAGPIGFVGLTVPHIVRFWTGSRHARLLPISALAGALLMVWSDTAARCLRPDTEIP VGVITAIVGAPVLVVLLRRQASRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1913 | YP_005682168.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 1e-35 | 41 |
| CpC231_1907 | YP_005684260.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 1e-35 | 41 |
| cpfrc_01919 | YP_003784319.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 1e-35 | 41 |
| CpI19_1928 | YP_005686352.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 1e-35 | 41 |
