Gene Information

Name : HMPREF0675_3654 (HMPREF0675_3654)
Accession : YP_003580826.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 672420 - 673586 bp
Length : 1167 bp
Strand : -
Note : identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026

DNA sequence :
GTGAAGATTGCCGTTGCAGGATTGGGCTACGTCGGAATGGCCAATGCCGTGTTGCTGGCCCAGCATAACAGCGTCGTCGC
TATCGATATCGACGCTGAGCGGGTCGATATGGTCAACAACCGGCATACCACCATCGTTGATCCCCTCATAGCGGAGTACT
TGGCCCATCACAACCTGGACCTGCGCGCCACCACCGACCCGCAGGAAGCGTACCGGGGAGCAGACTTCGTCGTCATCGCC
ACCCCGACCAACTATGACCCTGGCCAAAACTACTTCGACACCTCAAGCGTCGACGAGGTCCTTGATCTGGTCCAGGAACT
CGCCCCTCACACGACGACCGTCATTAAATCAACAATCCCGGTGGGCTTCGTCGAGGGCGTTCGCAAGGAGCGCTCCGGGC
TTGACGTCATCTTCTCCCCCGAGTTCCTGCGAGAAGGTAAGGCTCTGTTCGATAACCTTCACCCCTCGCGGATCGTCGTC
GGGGCGGACTCCCCCAAAGCCCACCTCTTCGCCGACCTCATGGCTGCCGGGGCCATTGACACCAATGTCCCGGTGCTCTT
CGTCGGTGCCACCGAGGCCGAGGCCATCAAGCTCTTCGCCAACACCTACCTGGCGATGCGGGTGTCCTTCTTCAACGAGC
TCGACACCTATGCCTCCCAGCGCGGGCTGTCTACCCGTCAAGTCATTGACGGGGTCTGCCTCGATCCTCGCATTGGCAAC
CACTACAACAACCCGTCCTTCGGGTACGGCGGTTACTGCCTGCCTAAAGACACCCGTCAACTATTAGCCAATTACCAGGA
CGTGCCACAGACCCTCATCCAGGCCATCGTCGACTCCAACACCGTGCGCAAAGACTTTATCGCCTCTGACATCATTGCCA
GGGACCCGAAACGGGTGGGGATCTTCCGTCTGGTCATGAAGGCAGGTTCGGACAACTTCCGTTCCTCCTCGATCCAAGGC
GTCATGAAACGCATCAAGGCGAAGGGCATCGAGGTGGTCGTCTACGAGCCGACCTTTGACGGCGACGAGTTTTTCCACTC
GGAGGTCACCAAGAACCTTGCCTTCTTCAAAGCTAACTGCGACGTCATCATTGCCAACCGGATGTCACCGGATTTATCCG
ATGTCGCTGACAAGGTCTACACCCGGGATCTCTTCGGTGGGGACTGA

Protein sequence :
MKIAVAGLGYVGMANAVLLAQHNSVVAIDIDAERVDMVNNRHTTIVDPLIAEYLAHHNLDLRATTDPQEAYRGADFVVIA
TPTNYDPGQNYFDTSSVDEVLDLVQELAPHTTTVIKSTIPVGFVEGVRKERSGLDVIFSPEFLREGKALFDNLHPSRIVV
GADSPKAHLFADLMAAGAIDTNVPVLFVGATEAEAIKLFANTYLAMRVSFFNELDTYASQRGLSTRQVIDGVCLDPRIGN
HYNNPSFGYGGYCLPKDTRQLLANYQDVPQTLIQAIVDSNTVRKDFIASDIIARDPKRVGIFRLVMKAGSDNFRSSSIQG
VMKRIKAKGIEVVVYEPTFDGDEFFHSEVTKNLAFFKANCDVIIANRMSPDLSDVADKVYTRDLFGGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 5e-89 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0675_3654 YP_003580826.1 UDP-glucose dehydrogenase VFG0963 Protein 2e-94 52