Gene Information

Name : HMPREF0675_3445 (HMPREF0675_3445)
Accession : YP_003580629.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Unknown
Product : oxidoreductase, zinc-binding dehydrogenase family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 473146 - 474162 bp
Length : 1017 bp
Strand : +
Note : identified by match to protein family HMM PF00107

DNA sequence :
ATGAGCACCACACGTCCCACGACCACCCGTGCCGTCCACCTGGCCTCGCGCCCGCACGGCGCACCGACCGAGGACAACTT
TCGCATTGAGGAGATCAGCCTCCCCGAGCTATCCGACGGTCAAATCCTGGTTGCCAATGACGTCATGTCGGTCGATCCGT
ACATGCGTGGTCGGATGAACGACGTCAAGTCCTATGTGCCGCCTTTCCACATTGACCGGCCCCTTGACGGGGGTGCCGTC
GGTACCGTCATCGAGTCGCGCAGCGAGGATATTCCGGAAGGTAGCCACGTCAGTCACCAGCTCGGGTGGAGAGAGCATGC
CGTCCTTAACGCCGGTGATGCACACATCATTGACACCGACATCGCCCCTGCGTCGGCATATCTGAGTGTGCTGGGAATGA
CTGGGCTCACCGCCTACGCTGGCCTGACTCGTGCCGCCGAGATGAAGGCTGGTGACGCCGTCTTCGTTTCTGGAGCTGCC
GGAGCCGTCGGATCGATGGTTGGTCAGCTAGCACGGCTGCTCGGTGCCTCTCGGGTCATTGGTTCGGCTGGCACTGACGC
TAAGGTTGCCCGGTTGCGTGAGCTCGGCTTCGACGCCGCTTTCAACTACCACGACGGTCCGAGTACCGAGTTGCTTGGGC
AGGCAGCCCCCGATGGCATTGACGTCTACTACGACAACGTTGGTGGCGATCATCTGGAGGCCGCCATTGATCATCTCAAC
ATCGACGGTCGGGTAGCGATGTGTGGGGCGATATCCCAGTACAACTCCGTCGAACCGCCTTGTGCCCCCCGAAATCTCGC
ATTGGCCATCGGGAAACGCCTCACCCTACGTGGCTTCGTCATCGCTAAGTATGCCGAGGAGGTCCGTCCGGAGTTCCAAC
AGCGGATGGCCGAGTGGCTGCCGGCCGACGAAATCCACTGGGACGAGACTTTTCGTGACGGCCTCGACGCGGCTCCACAA
GCGTTCATCGACATGCTCGACGGCGCCAACACCGGGAAGATGCTAGTCCGGTTGTGA

Protein sequence :
MSTTRPTTTRAVHLASRPHGAPTEDNFRIEEISLPELSDGQILVANDVMSVDPYMRGRMNDVKSYVPPFHIDRPLDGGAV
GTVIESRSEDIPEGSHVSHQLGWREHAVLNAGDAHIIDTDIAPASAYLSVLGMTGLTAYAGLTRAAEMKAGDAVFVSGAA
GAVGSMVGQLARLLGASRVIGSAGTDAKVARLRELGFDAAFNYHDGPSTELLGQAAPDGIDVYYDNVGGDHLEAAIDHLN
IDGRVAMCGAISQYNSVEPPCAPRNLALAIGKRLTLRGFVIAKYAEEVRPEFQQRMAEWLPADEIHWDETFRDGLDAAPQ
AFIDMLDGANTGKMLVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 1e-53 41