Gene Information

Name : phoB (HMPREF0675_3400)
Accession : YP_003580584.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Virulence
Product : Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 429491 - 430171 bp
Length : 681 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGACCCGTGTACTCATCATCGAGGACGAAGAGTCCTATCGCGAGGCCACCGCCTTCATGCTGCGCAAAGAGGGATTTGA
GGTCAATACTGCCGCCAATGGCGCTGATGGTCTCGAAATCTACTCGCACAACGGTGCCGACATCGTACTGCTCGACCTCA
TGATGCCAGGGCTTCCAGGGACCGAAGTCTGCCGTCAGCTACGCCAGCGCGGCAATGTCGGGATCATCATGGTGACGGCT
AGGGATTCGGAGATCGACAAGGTTGTCGGGCTGGAGCTCGGAGCCGACGACTACGTCACCAAACCGTTTAGCCACCGAGA
ATTGGTCGCGCGCATCCGCGCTGTGACTCGTCGCGGCGGCCCTGAGATAGAGGTTTCCCCCGATGTGCTCGAGGAGAGCG
GGGTAAGGATGGACGTTGAGCGGCATGAGGTCAGCGTCGGCGGGACGGCAGTGCGACTTGCCCTCAAAGAGTTCGACCTA
CTTGAGGTGCTGCTGCGCAATGCAGGACGTGTCATGACCCGAGCCTCCCTCATCGACCGAGTGTGGGGAGCCGACTATGT
TGGCGACACTAAAACTCTTGACGTGCACATCAAAAGGCTGCGCGCAAAGATTGAAGATGACCCATCCCGTCCGGTGCGCA
TCATCACCGTACGCGGACTGGGCTACAAGTTTCAGGCCTAA

Protein sequence :
MTRVLIIEDEESYREATAFMLRKEGFEVNTAANGADGLEIYSHNGADIVLLDLMMPGLPGTEVCRQLRQRGNVGIIMVTA
RDSEIDKVVGLELGADDYVTKPFSHRELVARIRAVTRRGGPEIEVSPDVLEESGVRMDVERHEVSVGGTAVRLALKEFDL
LEVLLRNAGRVMTRASLIDRVWGADYVGDTKTLDVHIKRLRAKIEDDPSRPVRIITVRGLGYKFQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_012469.1.7685629. Protein 2e-47 46
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_012469.1.7686381. Protein 1e-45 44
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 AE000516.2.gene3505. Protein 4e-41 44
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 HE999704.1.gene2815. Protein 7e-44 43
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 AE016830.1.gene1681. Protein 3e-47 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_002952.2859905.p0 Protein 3e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_002745.1124361.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_009782.5559369.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_002951.3237708.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_003923.1003749.p0 Protein 4e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_002758.1121668.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_007622.3794472.p0 Protein 2e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_009641.5332272.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_013450.8614421.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 NC_007793.3914279.p0 Protein 5e-42 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 AE015929.1.gene1106. Protein 6e-33 41
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 BAC0638 Protein 9e-26 41
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 HE999704.1.gene1528. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 VFG1386 Protein 7e-34 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 VFG1389 Protein 5e-30 42
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 VFG0596 Protein 7e-33 41
phoB YP_003580584.1 Phosphate regulon transcriptional regulatory protein PhoB; Sensory transduction protein regX3 VFG1390 Protein 7e-36 41