Gene Information

Name : HMPREF0675_3376 (HMPREF0675_3376)
Accession : YP_003580561.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Virulence
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 407476 - 408234 bp
Length : 759 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATCAATGCCTCTCAGCTGGTAGTCCGACGCGGGCAACGAATCGTTTTAGAGAACATCGATTTTTCCGCAGGCCAAGG
GGTGACGGTGGGGGTCGTCGGCCCCAACGGTGCCGGAAAGTCCACGTTGCTGTCGGCCCTCTATCGCAACGTCTCGATCG
CCTCGGGGCAGGTCACGGTCAGTGACCACGATCTAGCCTCGATGAGTCGACGGGAGATCGCCCGCGAGGTGGCCGTCGTC
TCCCAGACCCCCGATCCATCCTTGCCACTGACAGTTCGAGACACCGTTGCCCTCGGTCGACTGCCGCACCGGTCCCTCAT
GGGATACGGGGACGCTGCAGATCGCAACATCGTCGAAGAGGCCCTAACCCGTACCGACCTCACCGACCTGGCTGACCGAC
TCGTCACCCAACTGTCTGGCGGGGAGCGTCAGCGGGTGCTCGTCGCTCGGGCCATTGCCCAACAAGCCGGCCATCTCCTT
CTTGACGAACCCACCAATCACCTTGACATCGGCCATCAGTTCGCCCTGCTCGACCTCGTCCGAACCATCAAGGCAACCAC
CGTCATCGTGCTACATGACCTCAATCTGGCTGCCCGGGTATGCGACCAGCTGGTGCTCCTCGCCGAGAAGCATCTGGTCG
CCACCGGCTCCTGCGAAGACGTCCTGCAGCCCGATCTGCTTTCGAAGGTCTATGAGGTGAACGTCGAACGGATCACCCAC
AACGGCCACATCCATCTTTTGTTTAACCCACCACGATGA

Protein sequence : 
MINASQLVVRRGQRIVLENIDFSAGQGVTVGVVGPNGAGKSTLLSALYRNVSIASGQVTVSDHDLASMSRREIAREVAVV
SQTPDPSLPLTVRDTVALGRLPHRSLMGYGDAADRNIVEEALTRTDLTDLADRLVTQLSGGERQRVLVARAIAQQAGHLL
LDEPTNHLDIGHQFALLDLVRTIKATTVIVLHDLNLAARVCDQLVLLAEKHLVATGSCEDVLQPDLLSKVYEVNVERITH
NGHIHLLFNPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-61 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0675_3376 YP_003580561.1 ABC transporter, ATP-binding protein BAC0164 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0675_3376 YP_003580561.1 ABC transporter, ATP-binding protein VFG1042 Protein 1e-32 41