|
Name : dnaB (HMPREF0675_5319) Accession : YP_003582431.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2362889 - 2364235 bp Length : 1347 bp Strand : + Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGTCCAGCGCACCCGCCGAGCCGGGCCCGTCCTTGGACCGTAACCCTCCCCAGGACATTGACGCCGAAAAGTCCGTACT AGGTGCCATGTTGTCTTCCAAAGACGCCATCGCCGACGTCGTCGAAGAGATCAAGGGCGTCGATTTCTACCGCCCTGGAC ACGAGCTCATCTTCAACACCATCACCGATCTATACGGTCGCGGCGACCCTGCCGACACCGTCACCACCGCCGATGAACTA GATCGCCGCGGCGAACTCGAGCGAGCCGGCGGACGCCTGTACCTCGCAGAATTGCTAACCAATGTCACCGTCACCGCGAA CGCGGCATACTACGCCAAGATTGTCGCCGAGAAAGCCGTTCTTCGTCGCCTCGTCGAAGCGTCAATCCGCATCGCTCAGA TGGGCTACCAGGGACAAGGAGAGGTCGCCGACATCGTCGACGCCGCCCAGCAGACCCTCTACGACGTCTCCACCCGCAAA ACCAGTGAGGAATACCACCCACTCTCGGAATTATTCGAGAGCACCTTTGACGAGCTTGAGGCCATTGAGGCTCGCGGCGA CGCCATGGCCGGCATTCCTACTGGGTTCACCGACCTTGATGAGCTCACCAACGGGTTCATGCCCGGCCAGATGATCATCG TCGCCGCCCGTCCGGCCATGGGAAAATCCACTCTGGCCCTCGACTTTGCCCGCGCCGCCGCGATCAAGAACCATCTCGCA GCGGCAATCTTCAGCCTCGAGATGGGGCGCAACGAGATCGTCATGAGATTGCTATCTGCCGAGGCAGGGATCGAGCTGTC CCGGATGCGTGCGGGGCGCCTGTCCGAAGAGGATTGGCAGCGCATGGTCGACAAAACAACACAGATCTCGTCAGCACCGT TGTTCATCGATGACTCCCCTAACCTGACGATGATGGAAATCCGCGCCAAAGCAAGGCGGATGAAGCAAAAATTCGACCTC AAGCTCGTCATCATCGATTACATGCAGCTCATGACCTCCGGCAAAAAGGTGGAGTCGCGTCAGCTGGAAGTCTCGGAGTT TTCTCGCCAGATCAAACTGTTGGCTAAGGAGCTCGAGATCCCTGTCGTGGCCCTTTCCCAGCTCAACCGTGGCCCCGAGC AGCGCACCGACAAGAAACCCATGATGAGTGACCTGCGCGAGTCCGGGTCACTCGAGCAGGACGCTGACGTCGTCATCCTG TTGCACCGAGAGGACGTTTACGACAAAGAGTCCCCGCGCGCCGGCGAGGCCGATATCATCGTCGCCAAGCACCGCAACGG GCCGACACGGACCGTGCCAGTGGTGTTCCAAGGCCACTACTCGCGTTTCGTCGACATGCAGCGCTAA Protein sequence : MSSAPAEPGPSLDRNPPQDIDAEKSVLGAMLSSKDAIADVVEEIKGVDFYRPGHELIFNTITDLYGRGDPADTVTTADEL DRRGELERAGGRLYLAELLTNVTVTANAAYYAKIVAEKAVLRRLVEASIRIAQMGYQGQGEVADIVDAAQQTLYDVSTRK TSEEYHPLSELFESTFDELEAIEARGDAMAGIPTGFTDLDELTNGFMPGQMIIVAARPAMGKSTLALDFARAAAIKNHLA AAIFSLEMGRNEIVMRLLSAEAGIELSRMRAGRLSEEDWQRMVDKTTQISSAPLFIDDSPNLTMMEIRAKARRMKQKFDL KLVIIDYMQLMTSGKKVESRQLEVSEFSRQIKLLAKELEIPVVALSQLNRGPEQRTDKKPMMSDLRESGSLEQDADVVIL LHREDVYDKESPRAGEADIIVAKHRNGPTRTVPVVFQGHYSRFVDMQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-62 | 42 |
