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Name : serS (HMPREF0675_5291) Accession : YP_003582403.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2339541 - 2340815 bp Length : 1275 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGATCGATCCCAAGCTCCTGCGAACGGATCCGGACGCCGTTCGTCGCTCCCAGGCCGCCCGCGGCGAGGACTCCTCGGT TGTGGACGACGTTGTCGCCGCAGATGAGGCTCGTCGTGAGGCTATTGCTGCCCATGAGAACCTGCGTGCAGAACAGAAGG GACTCGGCAAGCGAATCGCTAAAGCATCCGGTGACGAGAAGGCGGAGTTGCTGTCCCGTACTAAGACGATTTCCGGTGAG GTTGCTGACCTCAAGAAAGCCGCGGACGAGGCAGATGCCAAGTTTACCGAGCTTGCCAAGACTCTCGGCAATATCGTTAT TGACGGGGTTCCTGCTGGTGGTGAGGATGAAGGTGTCATCAAGGAAACCGTCGGAACTCCCCGCGATTTTGCCGCTGAAG GGTTCGAGCCTAAGGATCACCTCGAGATCGGTGAAGCCCTCGGCGCTATCGATATGGAGCGCGGCACAAAGATTTCTGGA TCCCGGTTCTACGTCCTCACCGGCGTTGGCGCTCAGTTGGAATTCGCGCTGCTCAACCTAGCGATGTCTAAAGCGGCTCA GTGGGGATTCACCCCCATGATCCCGCCGGCCCTCGTCAAGCCGTCGGCTATGGAGGGTACCGGATTCCTCGGTCAAGCTG CCGATGACGTTTACTACTTACCCAAGGATGACCAGTACCTTGTCGGAACTTCCGAGGTGGCTCTAGCAGCTTTCCATTCT GACGAGATTCTCGACGATGCCGAGTTGCCCAAACGCTACGTCGCCTTTTCTCCATGCTACCGACGCGAGGCTGGCTCGTA TGGCAAGGACACCCGCGGTATCTTTCGCGTTCATTGGTTCGACAAAGTCGAGATGTTCGTTTATTGCCTACCGCAGGAGG CTGAGGCCTGGCATGAGAAGTTGCTGAGTTTCGAGAAGGACTTCATTACCGCGCTACAAATCCCGTTCCAGGTGCTCGAC GTTGCCTCCGGTGACTTGGGCCTGTCTGCTGCCCGCAAGTTCGATTGTTATGGCTGGCTGCCAACCCAGAACCGCTATCG TGAGATCACCTCGACGTCGAACTGCACTACCTTCCAGGCCCGGCGCCTGTCTATTCGCCATCGCGGACCTGACGGCGTTG AACCCCTGGCCACTCTCAATGGCACCTTATGCGCGATGACTCGCATCATCATCATGCTGTTGGAGAACCACCAGCAGGCT GATGGCTCGGTGCGCATACCCGAGGCACTGCGTCCTTATCTGGGTGGGCGTGAGTTCATTGAGCCTGTGAAGTGA Protein sequence : MIDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRIAKASGDEKAELLSRTKTISGE VADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISG SRFYVLTGVGAQLEFALLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAADDVYYLPKDDQYLVGTSEVALAAFHS DEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHEKLLSFEKDFITALQIPFQVLD VASGDLGLSAARKFDCYGWLPTQNRYREITSTSNCTTFQARRLSIRHRGPDGVEPLATLNGTLCAMTRIIIMLLENHQQA DGSVRIPEALRPYLGGREFIEPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-58 | 42 |
