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Name : lysS_1 (HMPREF0675_3222) Accession : YP_003580410.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 247960 - 249492 bp Length : 1533 bp Strand : + Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : GTGAGTTCTGACACTGCATCCAGCCAGTCCCCTGACGTCTCCGAGCAGATGCAGGTCCGCCTCGACAAGCGGGCCCGGAT CATCGCTGACGGAGGCCAGGCTTATCCGGTCGATTTGCTACGCGACCACACCCTGGTCCAGGTTCGTCAGAAATACACCG ACGACACCGGGGAGCTGACCTTGGCGCCTGGCGAGGAGACCACCGATGAGGTCACCGTCGGCGGACGTGTCGTCTTTGTC CGCAATACCGGCAAACTGTGTTTCGCCAGCTTGCAGGACGGGTTTACCGAGACTTCCAACGGTGAGCGGTTGCAGATCAT GCTTTCCAAAGCCGAGGTGGGCGATGAGTCCTTGGCTGCGTGGAAGTCCGACGTTGACCTGGGTGACCACGTCTGGGTGC GTGGCCGAGTCGTCGTCTCTCGTCGTGGTGAGTTATCCATCATGGCTGCTGAGTGGCGGATGGCCTCCAAGGCTCTGCGT CCGCTGCCGACCCTCCATAAGGAGCTCTCGGAGGAGAGCCGGGTGCGTCGTCGCTACGCGGATCTCGTCGTTCGTGAAGA GTCTCGCCAGATGGTGCGCACCCGCGCCGTTATCACCCGCGCGGTGCGTCGCGCCCTCGACGAGCGCGGTTTCCTTGAGA TCGAGACTCCGATCCTGCAGTTGGTCCACGGTGGTGCCGCAGCCCGCCCGTTTAATACCCACCTCAATGCCTTCGACATT GACATGAGTTTGCGTATCGCTCTTGAGCTCTATCTCAAGCGGACGATGGTCGGCGGCACCGATCGGGTCTACGAGATGGG TCGGGTCTTCCGCAACGAGGGTATTGATTCCAGCCACTCGGCCGAGTTCTCTATGCTCGAGGCCTACATGAGCTGGGGCA ACCAATTCACTATTGCTGAGGTGATCAAGGACATCATCATGGCGGTGGCCGACGCCCTCGACGTCCATCAGATTGAGACC CCCAAGGGCACTATCGACCTCGACGGGCAGTGGCGTTGGGTCAGCGTCTACCCAGGCCTGTCGGAAAAACTAGGGCGTGA AGTCACCCTTGACACCCCGTTGGAGGAGTTGCAGTCCATCGCCGCTGAGCACGAGATTGAGATCGACCAGTCTTGGGAGG CCGGCAAGGTCGTTATGGAGCTTTTCGGTGAACTCGTCGAGCCGGGCCTTATCAACCCCACCTTCGTCTGTGATTACCCG GCTATCGCCCAGCCGCTGGCCCGTCCGCACCGCGACGATCCTCGCATGGTTGAGGCCTGGGACCTCATCATTGGCGGGAT GGAGCGCGGTACTGGCTTCTCCGAGCTCGTCGACCCAGTCATCCAGCGCGAAGTGCTTACCAAGCAATCCCTCGCTGCTG CCGCGGGTGACCCTGAGGCGATGCAGCTTGACGAGGACTTCCTCGAGGCCCTGGAATTCGGCTGCCCGCCCATGGGTGGT CTGGGGCTGGGTGTCGACCGGCTGGTGATGCTCTTTACCAACGCTGGGATCCGCGAGACGATCCTCTTCCCGCTGCTCAA GCCGGAACACTGA Protein sequence : MSSDTASSQSPDVSEQMQVRLDKRARIIADGGQAYPVDLLRDHTLVQVRQKYTDDTGELTLAPGEETTDEVTVGGRVVFV RNTGKLCFASLQDGFTETSNGERLQIMLSKAEVGDESLAAWKSDVDLGDHVWVRGRVVVSRRGELSIMAAEWRMASKALR PLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGGAAARPFNTHLNAFDI DMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIET PKGTIDLDGQWRWVSVYPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEPGLINPTFVCDYP AIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGG LGLGVDRLVMLFTNAGIRETILFPLLKPEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-112 | 50 |
