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Name : HMPREF0675_5134 (HMPREF0675_5134) Accession : YP_003582257.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2194204 - 2196024 bp Length : 1821 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : GTGAGCAAGACCTCCACGTCCCCGCAGGTGTGCCCCGGCGCTGCCGCACCGGAAGATATTCGCGACTACCAGACCAAGCA CCGTGCCGGTGGCAAGGCCCTGTCGTCGATCATGAAACCTATCCGCGAGTACGTCCTGATCGCGCGGATCCTCGTCATTG CGTCCTGCATCGTCGCCCTTGCCCCGTACGTCGCCCTGACGAGACTCGGCGCGATCCTGCTAGGTGACCACGTCGACCAC GAGGCGCTCACCCGCACCGCCAATGTGCTGTGGATGGCCTTCTGCCTCCAGGCCCTGCTCTACGTGTTGGCCCTCGTCAT CACTCACATCGCCGACATCAAGCTGCGCAACATACTCCAGGACCGCATCATCGACCGCATCTCGAAGGCCCCACTGGCCT GGTTCAGCTCGTCGTCAACCGGTCGGGTGCGCAAGGCCATCCAGGACGACACCGTCCAGATCCACATGCTCGTCGCCCAT GCGCCCGTTGAGCAAACCGCAGCCGTGGGAGTTCCGCTCGTACTGCTCGTCTATGCCTTCGTGGTGGACTGGCGGCTGGG ATTTCTCTCCATCGCCACCTTCCCAATCTACGCCCTGCTGCAGTGGGTGACGATGCGAGACATGGCCACCAAGACCGCCG AGATGGACGACAAGCTCGCCGACATCTCGTCCTCGTCGATCGAGCTGACGGAGGGGATCCACGTCGTCAAGAACGTCGGA CAGACCGGCAAGGCCCATCGTCGCTTCACCCGTGCGTGCGAGGAGTTCGCCCGGTTCTACTGGGACTGGTGTGGCCCGCT CATCAAGGCGTCGGCCCTGTCTCTGTCGGTGATCTCGGTGGCAGCTCTCATGGCGATCAATCTAAGATTCGGTCTACTCA TGGCCAAGGCCGGCTGGGTGGGCGTCACCGACGTCCTCACCTGTTCACTCATCGCCCTGGTCCTGCCGCGCACCATCGAG GTACTGGGCAACATGGCATGGGGTTACCAACAGGCCGGCAACGCGGCTCTGCGTCTGCAGGACGTGCTGTCCATCGAGCA GATCAGCCATCCACAGGTCAGCGTGCGGATTCCTGACGACATGACGGTCACCTTCGACGACGTCAGCTCCTCCTACCTCA CCCCTGACGGCGTCATTCCGGCGCTGAGTCATGTCAACCTGACACTGCGTCCAGGAACTGTCACGGCTCTGGTCCGGCCG TCGGGGTCGGGCAAGTCGACCTTGGCGACGATGCTCGCTCGCTTTCGCGACCCGGATTCCGGGGTGGTGCGCATCGGTGG GGTCGACCTCAAGGACGTTGCCCAGAATGACCTCTACCGGTTGGTGTCCTTCGTCCTCCAGGATCCGTACATGCAGCGTC GGTCCATTCGTGACGTCATCACCTTGGCTCGTCCCGACGCCACCGACGATCAGGTGCGCGAGGCTGCTCGTGCCGCCCAC ATCCTTGACGACATCGACGCCCTGCCGAAGGGTTTCGACACCGTCTTGGGGGATGACACTGATTTCTCGGGTGGTCAGAA ACAGCGGTTGTCCATTGCTCGCGCCGTGCTCGCCGACGCCCCGATCCTCGTGCTCGACGAGGCGACGGCCGCCACCGATC CGGACTGCGAGGCGGAGATCCAGCAGGCCCTGGCCGCACTGGCCCGAGGCCGAACCGTGCTCGCCATCGGTCACCACGCC GAGTCGGTGGCCGGAGCCGACGTCATCTGCGTCATGGAGAACGGTGGCATCGCAGCTTGCGGTTCGTCCGAGGAATTGGC CGATCAGCCCTATTGGGCGCGTCTGTCGGCAGGGCGAGCGATGGAAGGAGCCACCCGATGA Protein sequence : MSKTSTSPQVCPGAAAPEDIRDYQTKHRAGGKALSSIMKPIREYVLIARILVIASCIVALAPYVALTRLGAILLGDHVDH EALTRTANVLWMAFCLQALLYVLALVITHIADIKLRNILQDRIIDRISKAPLAWFSSSSTGRVRKAIQDDTVQIHMLVAH APVEQTAAVGVPLVLLVYAFVVDWRLGFLSIATFPIYALLQWVTMRDMATKTAEMDDKLADISSSSIELTEGIHVVKNVG QTGKAHRRFTRACEEFARFYWDWCGPLIKASALSLSVISVAALMAINLRFGLLMAKAGWVGVTDVLTCSLIALVLPRTIE VLGNMAWGYQQAGNAALRLQDVLSIEQISHPQVSVRIPDDMTVTFDDVSSSYLTPDGVIPALSHVNLTLRPGTVTALVRP SGSGKSTLATMLARFRDPDSGVVRIGGVDLKDVAQNDLYRLVSFVLQDPYMQRRSIRDVITLARPDATDDQVREAARAAH ILDDIDALPKGFDTVLGDDTDFSGGQKQRLSIARAVLADAPILVLDEATAATDPDCEAEIQQALAALARGRTVLAIGHHA ESVAGADVICVMENGGIAACGSSEELADQPYWARLSAGRAMEGATR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 5e-120 | 52 |
