Gene Information

Name : HMPREF0675_5094 (HMPREF0675_5094)
Accession : YP_003582220.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2156497 - 2157231 bp
Length : 735 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTCTGCCTCAGTGACGGCCGCAACCACCATGACGTCTCGCACGGCCTCAGCGGTCCGCACTCTCGACCTCACTAAAAC
ATACGGGTCCGGGACGACCCTTGTGAGAGCCCTGCGGTCGGTGACCCTCGACATACCTTCCGGACGGTTCACCGCAATCA
TGGGAGCGTCAGGTTCGGGCAAGTCGACCCTGCTGCACTGCATCACCGGGCTCGACTCCTCTACTTCGGGCCGGGTGTGG
ATTGGCGATACCGAGATCACCCATCTCGACGACGACGCCCTCACCAAGCTACGTCGCCAGCACGTCGGGTTCGTGTTTCA
ATCTTTCAACCTCATGCCCACTCTCAGCGCTGCTGACAACATCACCCTGCCGCTGCGTCTGTCGCACACCAAGGTCGACA
AGGAATGGTTTGACCACATCACCGGAATGCTCGGCATTACCGAGCGTCTTGGCCATAAGCCGTCGCAGATGTCTGGCGGA
CAGCAGCAGCGCGTCGCCGTCGCCCGCGCCCTGGTGACCCGCCCCGACGTCATCGTCGCCGACGAGCCGACCGGCGCCCT
CGATTCGGAGGCCAGCGGCGATCTGCTCACCTTCCTGCGTCACTGCGTCGACGATCTTGGTCAGACCGTCGTCATGGTCA
CCCATGATCACGACGCCGCTGCCAGGGCCGACGACATCGTCACCGTAACCGACGGCCAGGTCTCGACCGCTCGCAGCCAG
GAGGCCCTGGCATGA

Protein sequence : 
MSASVTAATTMTSRTASAVRTLDLTKTYGSGTTLVRALRSVTLDIPSGRFTAIMGASGSGKSTLLHCITGLDSSTSGRVW
IGDTEITHLDDDALTKLRRQHVGFVFQSFNLMPTLSAADNITLPLRLSHTKVDKEWFDHITGMLGITERLGHKPSQMSGG
QQQRVAVARALVTRPDVIVADEPTGALDSEASGDLLTFLRHCVDDLGQTVVMVTHDHDAAARADDIVTVTDGQVSTARSQ
EALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0675_5094 YP_003582220.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 7e-46 48
HMPREF0675_5094 YP_003582220.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 3e-47 46
HMPREF0675_5094 YP_003582220.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 2e-36 41