Gene Information

Name : nifJ (HMPREF0675_3202)
Accession : YP_003580390.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Virulence
Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0674
EC number : 1.2.7.1
Position : 219708 - 223322 bp
Length : 3615 bp
Strand : -
Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176

DNA sequence :
ATGGCAAATAGCTCCGACTCCCGCGTCCGCACCATTGCCGACGGCAACACCGCCGCCGCCTCGGTCGCCTATCGTTGCAA
CGAACTGTGCTCGATCTACCCGATCACCCCGTCCTCCCCGATGGCTGAAACCGCCGACGAGTGGTCTGCCGCCGGGCGCA
AGAACATCTGGGGAGACATCCCCACCGTTATGGAGATGCAGTCCGAAGGTGGCGCTGCCGGGGCCATACACGGCGCTCTG
CAGGGTGGCGCCCTGAGCACCACCTTCACGGCCTCCCAAGGCCTACTGCTCATGATCCCGAATATGTACAAGATCGCTGG
CGAGCTCACCAGCACGGTCTTCCATGTGGCCGCCCGTTCGCTGGCCGCCCAGGGCCTATCCATCTTCGGCGATCACCAGG
ACGTCATGGCCTGCCGTCAGACCGGCTTCGCCATGTTGTGCTCCTCGACCGTGCAGGAATGCCACGACCTGGCCCTCATC
AGCCAAGCAGCGACGATGCGCTCCCGCGTGCCCTTCATGCACTTCTTTGAAGGTTTCCGCACCTCCCACGAACTCAACGT
GCTCGAGATGCTCTCGGACGACGACATCCGACACTTCATCACCGATGACCTCGTCCACGCTCATCGGGAGCGCGCCCTCT
CTCCGGCTCACCCGTTCATCCGCGGCACCGCCCAGAACCCCGATACCCACTTCCAAGCTCGTGAGGCCGCAAACAAGTAC
TACGAGAAAGTGCCGAGCATCGTCCAGTCCCTCATGGACGAGTTCGCCCAGGTCGTCGGACGCCAATACCATCTCGTTGA
GTACCACGGTGATCCTGAAGCCACCGAGGTCATAGTCTGTATGGGCTCTGGCGCCCGCACCATCGAGCACACCATCGACC
ACTTCAACGCCCGCGGGCACAAGCTCGGTCTCGTCGAGTTGCACCTATTCCGTCCCTTCCCCACCGCCGAGGTCGTCAAA
GCCATCCCGGAGACAGCTCGTACCGTTGCCGTCTTAGACCGCACCAAGGAGCCCGGCTCGAACGGCGAGCCCCTCTTCCT
CGACGTGCTGGCTGCCTTATCCGAGGCTCATTCCCGCGGCACCCGAAATTCCATGCCGATTGTCTCAGGCGGCCGTTACG
GGATCTCGTCAAAGGAATTCACCCCCGGTATGGTGGCCGGGATCGTCGCCGAGCTCGAGCTGGAGAGTCCGCGTCCCCGC
TTCACCATCGGTATCGACGACGACGTCACCGGCATATCCCTGCCATGGGAACCCCTCGACATCGAGGATCCCACAACGAT
CCGCGCAGTGTTCTACGGCATGGGTTCTGACGGCACCGTCGGTGCTAACAAGAACACCATCAAGATCCTCGGATCGGACC
CCAACACCTACGCCCAGGGCTACTTCGTCTACGACTCTAAGAAATCCGGATCCAAGACGACCTCCCACCTGCGTTTCGGA
CCCAAACCGATCGAGGCCCCCTACCTGGTCAGCCAGGCAGGATTCATCGGTATCCACGCCTGGGGGATCCTGGAGTCGAT
GGATGTGCTGACAATGGCCCGCGAGGGAACCACCGTTCTACTCAACTCTCCGTACTCAGCCGATGAGGTGTGGGACAAGC
TGCCCGACACCATGCAACGTCAGGTCCTCGATAAGCACCTCGACCTGTGGACCATCGACGCCCTGTCCGTAGCCCGCAAG
GTGGGTCTGCGTAACCGCACCAACACCATCCTGCAAACCTGCTTCTTCGCGATCTCTGGCGTGCTGCCCAAGGATGAGGC
CATCGCGAAGATCAAGGATTCGATCCAAAAGACCTACGGTAAAAAGTCCCAGAAGATCGTCGAGATGAATCATGCGGCCG
TCGACGCCTCCCTGGAACACCTACATCAGGTCAAGGTTCCCGACCAGATGACTGCCAACCACAGCCTCATCCCGGCTGTG
CGCGAGGACTCCCCCAAGTTCGTCAAGAATGTCACCGCCCGAATGATCGAGGGATTCGGCGACCTGCTGCCCGTGTCGGC
CCTGCCCGATGACGGCACCTACCCTGCCGGCACCACCAAATATGAGCAGCGGACGCTATCGGACGTCATCGCCACCTGGG
AGCCCAACGCCTGCATCCAGTGCGGCAACTGCGCCTTCGTCTGCCCACACGGCGTCATCCGCTCCAAGTACTACCCGCAG
TCTCAGCTCGAGGGTGCCCCGGAATCCTTCCAGTCCGCAGAACTCAATGCCGCCGGTCTGCCGGAGTCCTGCTACACCCT
GCAGGTCGTCCCCGACCAGTGCACCGGCTGCGGACTGTGCGTCGAGGCCTGCCCGGCCCACCCAGTCGGAGAACCCGACC
GCAAGGCCATCAACCTTGAAGAGCACCTCGACAAGACCGTCCAGCGCGAGAACGTGAAGTTCTTCGAGACAATCCCGGTT
AATGATCGCTCCCGTGTCGACTTCGCCACCGTACGAGGCACCCAGTTCCTGGAGCCCCTCTTCGAGTTCTCCGGAGCCTG
CTCGGGATGTGGCGAGACACCTTACGTCAAACTCATCACCCAGCTCTTCGGTGACCGCGCCGAGGTTGCCAACGCCACTG
GCTGCTCCTCCATCTACGGCGGTAACTTGCCGACGACCCCGTGGGGCAAGAACGCATCAGGGCGTGGCCCGGCTTGGTCG
AACTCGCTATTCGAGGACAACGCCGAATTTGGCCTGGGCATGCGAATGGCCGCCAACGTCCAAACCGTGTTGGCCAGACG
CCGCCTCCAGGAGGTGTCCAGCCAACTCGACCCGGAGTTCGTCGAGGATCTGCTACATGCCCCGCAGCTGACCGAGCACG
ACCTCCAGAGCCAGCAGCACCGCGTCAAGGAGCTCCAAGCCAAGCTCGCCGACATGGAACAAACCCCGGCAGTGCGCGAC
CTCATGAGCGTCGCCGACCACTTACTGCGCCGGTCGGTGTGGATTATCGGCGGTGACGGATGGGCTTACGACATCGGTTC
CGGTGGCGTCGACCACGTGCTTGCCTCCGGCCGCGACGTCAACGTCCTGGTCCTCGACACCGAGGTGTACTCCAACACCG
GTGGTCAGGCATCGAAATCGACCCCGCTAGGGGCAGTTGCCAAATTCGCCTCGGCTGGCAAACCCACCGCCAAAAAAGAC
ATGGCCCTGCAAGCCATCGCCTACGGGTCGGTGTACGTCGCCCGCGTGGCCCTGGGCGCCGATCCGCAGCAAACCCTGCG
GGCCTTCCGCGAGGCCGAGGCCTACCCTGGTCCGAGCCTCATCATCGCCTACAGCCACTGCATCGCCCACGGCTACGACC
TGCGCAACGGCCTGGACCAGCAGTACAAGGCGGTCCACTGTGGACACTGGCCGCTGATGCGTTACAACCCGGTGCTAGCC
GACGAAGGACGCAACCCATTCCTGCTCGACTCCCCCAAACCCGACGAGACGTGGCGGGAGTACACCAAGCTCGAGCTGCG
TTACCGGATGCTCCAGAAGGCCCATCCGGAAGAGGCCGAACGTATGCTGGACCTGGGCCAGCGCCAGGTAGAGCGTCGCT
ACGCCGAGTATGCCGAAATGGCATCCCGCACCGCCGAGGACTTCGCCGTCGATGCCCGTATGTCCGAGTTCGCCGCTTCA
TCCAACCGCGCCTGA

Protein sequence :
MANSSDSRVRTIADGNTAAASVAYRCNELCSIYPITPSSPMAETADEWSAAGRKNIWGDIPTVMEMQSEGGAAGAIHGAL
QGGALSTTFTASQGLLLMIPNMYKIAGELTSTVFHVAARSLAAQGLSIFGDHQDVMACRQTGFAMLCSSTVQECHDLALI
SQAATMRSRVPFMHFFEGFRTSHELNVLEMLSDDDIRHFITDDLVHAHRERALSPAHPFIRGTAQNPDTHFQAREAANKY
YEKVPSIVQSLMDEFAQVVGRQYHLVEYHGDPEATEVIVCMGSGARTIEHTIDHFNARGHKLGLVELHLFRPFPTAEVVK
AIPETARTVAVLDRTKEPGSNGEPLFLDVLAALSEAHSRGTRNSMPIVSGGRYGISSKEFTPGMVAGIVAELELESPRPR
FTIGIDDDVTGISLPWEPLDIEDPTTIRAVFYGMGSDGTVGANKNTIKILGSDPNTYAQGYFVYDSKKSGSKTTSHLRFG
PKPIEAPYLVSQAGFIGIHAWGILESMDVLTMAREGTTVLLNSPYSADEVWDKLPDTMQRQVLDKHLDLWTIDALSVARK
VGLRNRTNTILQTCFFAISGVLPKDEAIAKIKDSIQKTYGKKSQKIVEMNHAAVDASLEHLHQVKVPDQMTANHSLIPAV
REDSPKFVKNVTARMIEGFGDLLPVSALPDDGTYPAGTTKYEQRTLSDVIATWEPNACIQCGNCAFVCPHGVIRSKYYPQ
SQLEGAPESFQSAELNAAGLPESCYTLQVVPDQCTGCGLCVEACPAHPVGEPDRKAINLEEHLDKTVQRENVKFFETIPV
NDRSRVDFATVRGTQFLEPLFEFSGACSGCGETPYVKLITQLFGDRAEVANATGCSSIYGGNLPTTPWGKNASGRGPAWS
NSLFEDNAEFGLGMRMAANVQTVLARRRLQEVSSQLDPEFVEDLLHAPQLTEHDLQSQQHRVKELQAKLADMEQTPAVRD
LMSVADHLLRRSVWIIGGDGWAYDIGSGGVDHVLASGRDVNVLVLDTEVYSNTGGQASKSTPLGAVAKFASAGKPTAKKD
MALQAIAYGSVYVARVALGADPQQTLRAFREAEAYPGPSLIIAYSHCIAHGYDLRNGLDQQYKAVHCGHWPLMRYNPVLA
DEGRNPFLLDSPKPDETWREYTKLELRYRMLQKAHPEEAERMLDLGQRQVERRYAEYAEMASRTAEDFAVDARMSEFAAS
SNRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFJ97267.1 pyruvate ferredoxin Virulence Not named Protein 0.0 46