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Name : nifJ (HMPREF0675_3202) Accession : YP_003580390.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 219708 - 223322 bp Length : 3615 bp Strand : - Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGGCAAATAGCTCCGACTCCCGCGTCCGCACCATTGCCGACGGCAACACCGCCGCCGCCTCGGTCGCCTATCGTTGCAA CGAACTGTGCTCGATCTACCCGATCACCCCGTCCTCCCCGATGGCTGAAACCGCCGACGAGTGGTCTGCCGCCGGGCGCA AGAACATCTGGGGAGACATCCCCACCGTTATGGAGATGCAGTCCGAAGGTGGCGCTGCCGGGGCCATACACGGCGCTCTG CAGGGTGGCGCCCTGAGCACCACCTTCACGGCCTCCCAAGGCCTACTGCTCATGATCCCGAATATGTACAAGATCGCTGG CGAGCTCACCAGCACGGTCTTCCATGTGGCCGCCCGTTCGCTGGCCGCCCAGGGCCTATCCATCTTCGGCGATCACCAGG ACGTCATGGCCTGCCGTCAGACCGGCTTCGCCATGTTGTGCTCCTCGACCGTGCAGGAATGCCACGACCTGGCCCTCATC AGCCAAGCAGCGACGATGCGCTCCCGCGTGCCCTTCATGCACTTCTTTGAAGGTTTCCGCACCTCCCACGAACTCAACGT GCTCGAGATGCTCTCGGACGACGACATCCGACACTTCATCACCGATGACCTCGTCCACGCTCATCGGGAGCGCGCCCTCT CTCCGGCTCACCCGTTCATCCGCGGCACCGCCCAGAACCCCGATACCCACTTCCAAGCTCGTGAGGCCGCAAACAAGTAC TACGAGAAAGTGCCGAGCATCGTCCAGTCCCTCATGGACGAGTTCGCCCAGGTCGTCGGACGCCAATACCATCTCGTTGA GTACCACGGTGATCCTGAAGCCACCGAGGTCATAGTCTGTATGGGCTCTGGCGCCCGCACCATCGAGCACACCATCGACC ACTTCAACGCCCGCGGGCACAAGCTCGGTCTCGTCGAGTTGCACCTATTCCGTCCCTTCCCCACCGCCGAGGTCGTCAAA GCCATCCCGGAGACAGCTCGTACCGTTGCCGTCTTAGACCGCACCAAGGAGCCCGGCTCGAACGGCGAGCCCCTCTTCCT CGACGTGCTGGCTGCCTTATCCGAGGCTCATTCCCGCGGCACCCGAAATTCCATGCCGATTGTCTCAGGCGGCCGTTACG GGATCTCGTCAAAGGAATTCACCCCCGGTATGGTGGCCGGGATCGTCGCCGAGCTCGAGCTGGAGAGTCCGCGTCCCCGC TTCACCATCGGTATCGACGACGACGTCACCGGCATATCCCTGCCATGGGAACCCCTCGACATCGAGGATCCCACAACGAT CCGCGCAGTGTTCTACGGCATGGGTTCTGACGGCACCGTCGGTGCTAACAAGAACACCATCAAGATCCTCGGATCGGACC CCAACACCTACGCCCAGGGCTACTTCGTCTACGACTCTAAGAAATCCGGATCCAAGACGACCTCCCACCTGCGTTTCGGA CCCAAACCGATCGAGGCCCCCTACCTGGTCAGCCAGGCAGGATTCATCGGTATCCACGCCTGGGGGATCCTGGAGTCGAT GGATGTGCTGACAATGGCCCGCGAGGGAACCACCGTTCTACTCAACTCTCCGTACTCAGCCGATGAGGTGTGGGACAAGC TGCCCGACACCATGCAACGTCAGGTCCTCGATAAGCACCTCGACCTGTGGACCATCGACGCCCTGTCCGTAGCCCGCAAG GTGGGTCTGCGTAACCGCACCAACACCATCCTGCAAACCTGCTTCTTCGCGATCTCTGGCGTGCTGCCCAAGGATGAGGC CATCGCGAAGATCAAGGATTCGATCCAAAAGACCTACGGTAAAAAGTCCCAGAAGATCGTCGAGATGAATCATGCGGCCG TCGACGCCTCCCTGGAACACCTACATCAGGTCAAGGTTCCCGACCAGATGACTGCCAACCACAGCCTCATCCCGGCTGTG CGCGAGGACTCCCCCAAGTTCGTCAAGAATGTCACCGCCCGAATGATCGAGGGATTCGGCGACCTGCTGCCCGTGTCGGC CCTGCCCGATGACGGCACCTACCCTGCCGGCACCACCAAATATGAGCAGCGGACGCTATCGGACGTCATCGCCACCTGGG AGCCCAACGCCTGCATCCAGTGCGGCAACTGCGCCTTCGTCTGCCCACACGGCGTCATCCGCTCCAAGTACTACCCGCAG TCTCAGCTCGAGGGTGCCCCGGAATCCTTCCAGTCCGCAGAACTCAATGCCGCCGGTCTGCCGGAGTCCTGCTACACCCT GCAGGTCGTCCCCGACCAGTGCACCGGCTGCGGACTGTGCGTCGAGGCCTGCCCGGCCCACCCAGTCGGAGAACCCGACC GCAAGGCCATCAACCTTGAAGAGCACCTCGACAAGACCGTCCAGCGCGAGAACGTGAAGTTCTTCGAGACAATCCCGGTT AATGATCGCTCCCGTGTCGACTTCGCCACCGTACGAGGCACCCAGTTCCTGGAGCCCCTCTTCGAGTTCTCCGGAGCCTG CTCGGGATGTGGCGAGACACCTTACGTCAAACTCATCACCCAGCTCTTCGGTGACCGCGCCGAGGTTGCCAACGCCACTG GCTGCTCCTCCATCTACGGCGGTAACTTGCCGACGACCCCGTGGGGCAAGAACGCATCAGGGCGTGGCCCGGCTTGGTCG AACTCGCTATTCGAGGACAACGCCGAATTTGGCCTGGGCATGCGAATGGCCGCCAACGTCCAAACCGTGTTGGCCAGACG CCGCCTCCAGGAGGTGTCCAGCCAACTCGACCCGGAGTTCGTCGAGGATCTGCTACATGCCCCGCAGCTGACCGAGCACG ACCTCCAGAGCCAGCAGCACCGCGTCAAGGAGCTCCAAGCCAAGCTCGCCGACATGGAACAAACCCCGGCAGTGCGCGAC CTCATGAGCGTCGCCGACCACTTACTGCGCCGGTCGGTGTGGATTATCGGCGGTGACGGATGGGCTTACGACATCGGTTC CGGTGGCGTCGACCACGTGCTTGCCTCCGGCCGCGACGTCAACGTCCTGGTCCTCGACACCGAGGTGTACTCCAACACCG GTGGTCAGGCATCGAAATCGACCCCGCTAGGGGCAGTTGCCAAATTCGCCTCGGCTGGCAAACCCACCGCCAAAAAAGAC ATGGCCCTGCAAGCCATCGCCTACGGGTCGGTGTACGTCGCCCGCGTGGCCCTGGGCGCCGATCCGCAGCAAACCCTGCG GGCCTTCCGCGAGGCCGAGGCCTACCCTGGTCCGAGCCTCATCATCGCCTACAGCCACTGCATCGCCCACGGCTACGACC TGCGCAACGGCCTGGACCAGCAGTACAAGGCGGTCCACTGTGGACACTGGCCGCTGATGCGTTACAACCCGGTGCTAGCC GACGAAGGACGCAACCCATTCCTGCTCGACTCCCCCAAACCCGACGAGACGTGGCGGGAGTACACCAAGCTCGAGCTGCG TTACCGGATGCTCCAGAAGGCCCATCCGGAAGAGGCCGAACGTATGCTGGACCTGGGCCAGCGCCAGGTAGAGCGTCGCT ACGCCGAGTATGCCGAAATGGCATCCCGCACCGCCGAGGACTTCGCCGTCGATGCCCGTATGTCCGAGTTCGCCGCTTCA TCCAACCGCGCCTGA Protein sequence : MANSSDSRVRTIADGNTAAASVAYRCNELCSIYPITPSSPMAETADEWSAAGRKNIWGDIPTVMEMQSEGGAAGAIHGAL QGGALSTTFTASQGLLLMIPNMYKIAGELTSTVFHVAARSLAAQGLSIFGDHQDVMACRQTGFAMLCSSTVQECHDLALI SQAATMRSRVPFMHFFEGFRTSHELNVLEMLSDDDIRHFITDDLVHAHRERALSPAHPFIRGTAQNPDTHFQAREAANKY YEKVPSIVQSLMDEFAQVVGRQYHLVEYHGDPEATEVIVCMGSGARTIEHTIDHFNARGHKLGLVELHLFRPFPTAEVVK AIPETARTVAVLDRTKEPGSNGEPLFLDVLAALSEAHSRGTRNSMPIVSGGRYGISSKEFTPGMVAGIVAELELESPRPR FTIGIDDDVTGISLPWEPLDIEDPTTIRAVFYGMGSDGTVGANKNTIKILGSDPNTYAQGYFVYDSKKSGSKTTSHLRFG PKPIEAPYLVSQAGFIGIHAWGILESMDVLTMAREGTTVLLNSPYSADEVWDKLPDTMQRQVLDKHLDLWTIDALSVARK VGLRNRTNTILQTCFFAISGVLPKDEAIAKIKDSIQKTYGKKSQKIVEMNHAAVDASLEHLHQVKVPDQMTANHSLIPAV REDSPKFVKNVTARMIEGFGDLLPVSALPDDGTYPAGTTKYEQRTLSDVIATWEPNACIQCGNCAFVCPHGVIRSKYYPQ SQLEGAPESFQSAELNAAGLPESCYTLQVVPDQCTGCGLCVEACPAHPVGEPDRKAINLEEHLDKTVQRENVKFFETIPV NDRSRVDFATVRGTQFLEPLFEFSGACSGCGETPYVKLITQLFGDRAEVANATGCSSIYGGNLPTTPWGKNASGRGPAWS NSLFEDNAEFGLGMRMAANVQTVLARRRLQEVSSQLDPEFVEDLLHAPQLTEHDLQSQQHRVKELQAKLADMEQTPAVRD LMSVADHLLRRSVWIIGGDGWAYDIGSGGVDHVLASGRDVNVLVLDTEVYSNTGGQASKSTPLGAVAKFASAGKPTAKKD MALQAIAYGSVYVARVALGADPQQTLRAFREAEAYPGPSLIIAYSHCIAHGYDLRNGLDQQYKAVHCGHWPLMRYNPVLA DEGRNPFLLDSPKPDETWREYTKLELRYRMLQKAHPEEAERMLDLGQRQVERRYAEYAEMASRTAEDFAVDARMSEFAAS SNRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 46 |
