Gene Information

Name : rplS (HMPREF0675_4489)
Accession : YP_003581635.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Unknown
Product : ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1530476 - 1530829 bp
Length : 354 bp
Strand : -
Note : identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024

DNA sequence :
ATGAGCAACATCATCGACGAGATCGACAAGGCCTCGATGCGCGACGACATCCCCGAGTTCCGTCCTGGCGACTCGGTGAA
GGTCCACGTCAAGGTTGTTGAGGGTAGCCGTACCCGTGTGCAGGTCTTCTCCGGGATCGTCATCTCGCGTACCGGTGGTG
GCGTCCAGGAGTCCTTTACCGTCCGCAAGCTGAGCTTCGGGACCGGTGTTGAGCGTACCTTCCCGCTGCATTCCCCGATC
ATTGACAAGATCGAGGTTGATCGCCACGGTGCGGTCCGTCGCGCCAAGCTGTACTACCTGCGCGGCCGGCGTGGCAAGGC
GGCCAAGATTAAGGAGAGGGGCTCAGCTCGCTGA

Protein sequence :
MSNIIDEIDKASMRDDIPEFRPGDSVKVHVKVVEGSRTRVQVFSGIVISRTGGGVQESFTVRKLSFGTGVERTFPLHSPI
IDKIEVDRHGAVRRAKLYYLRGRRGKAAKIKERGSAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-33 64
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-30 62