|
Name : pdp (HMPREF0675_4415) Accession : YP_003581566.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1467311 - 1468600 bp Length : 1290 bp Strand : + Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGACCAGCACCTATTCCGTCGTCGACCTTATCCGCGCTAAGCGCGAAGGCCAGACTCTCAACTCCGACCAAATCGCATG GCTTATCCGCGCCTACACCGACGACATCGTCGCCGACGAGCAGATGTCTGCCATGGCGATGGCGGTGTACTTCCAGGGGC TCGACGACGCTGAGCTGTCAGCCTGGACGACGGCGATGATCAAGTCGGGCGAGCGGATGTCCTTCGCTGGGCTGTCCCGC CCCACTGTCGACAAGCACTCCACTGGCGGCGTGGGCGACAAAATTACCTTGCCGCTGGCTCCCCTGGTGGCCGCGTGCGG TGCTGCCGTCCCACAGCTGTCTGGGCGTGGCCTGGGCCACACCGGAGGCACCCTCGACAAGATGGAGGCCATTCCCGGAT GGCGGGCGGATCTCTCTCATGACGAGATGGTCGCCCAGCTCGAGAAAGTCGGCGCCGTCATCTGCGCAGCGGGCCCGGGA CTAGCCCCTGCTGACAAGAAGCTCTACGCCCTGCGCGACGTTACCGGCACCGTCGAGTCCATCCCGCTGATCGCTTCGTC CATCATGAGCAAGAAGATCGCAGAGGGCACCGACAGCCTCGTCCTCGATGTCAAGACCGGCTCGGGTGCCTTCATGAAGA CAGATAAGGACGCCCGCGAACTCGCCAGCCGTCTCGTCGAGCTAGGTGAAGCCGCCGGGGTGCGTACCACCGCCCTACTG ACCCACATGGACGTCCCACTGGGTTACGCCTGCGGTAACGGCATCGAGGTTGCCGAATCCCTCGAGGTGTTAGCCGGCGG AGGTCCTGCCGACGTCGTCGAGCTCACCGTCGCCCTGGCCCGTCACATGGTGAAGGTGGCTGGATTGGACGGCATCGACC CGGCCGATGTACTCGCCAGTGGCCAGGCAATGGATGTCTGGCGCAACATGGTTCGTGCCCAGGGCGGCGACCCTGACGCT CCACTACCGATGGCCCACCACACCCAGGACATCGTCGCCACCGAGGCTGGCGTCATCACCGGGATTGATGCCATGTCCGT TGGCCTAGCTGCCTGGCGTTTGGGTGCCGGACGCGCCCGCAAAGAGGATCCGGTGCAAGCTGCGGCTGGCATCATGTTAA GAGTTCGCCCCGGCGACCGCGTTGTCACAGGCCAGCCATTGGCCACCCTGCTCACCGACACCCCCGACTCCATTGCGCGG GCCGAGGATGCCATGACCAACGCGTTCACCGTCGGGCAAACCTTCCAGCCGCAAGACATTGTCATCGACACCGTCGTAGC CCAGTCGTGA Protein sequence : MTSTYSVVDLIRAKREGQTLNSDQIAWLIRAYTDDIVADEQMSAMAMAVYFQGLDDAELSAWTTAMIKSGERMSFAGLSR PTVDKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKMEAIPGWRADLSHDEMVAQLEKVGAVICAAGPG LAPADKKLYALRDVTGTVESIPLIASSIMSKKIAEGTDSLVLDVKTGSGAFMKTDKDARELASRLVELGEAAGVRTTALL THMDVPLGYACGNGIEVAESLEVLAGGGPADVVELTVALARHMVKVAGLDGIDPADVLASGQAMDVWRNMVRAQGGDPDA PLPMAHHTQDIVATEAGVITGIDAMSVGLAAWRLGAGRARKEDPVQAAAGIMLRVRPGDRVVTGQPLATLLTDTPDSIAR AEDAMTNAFTVGQTFQPQDIVIDTVVAQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-110 | 57 |
