|
Name : HMPREF0675_4278 (HMPREF0675_4278) Accession : YP_003581437.1 Strain : Propionibacterium acnes SK137 Genome accession: NC_014039 Putative virulence/resistance : Unknown Product : putative L-fucose:H+ symporter permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0738 EC number : - Position : 1323787 - 1325220 bp Length : 1434 bp Strand : - Note : identified by match to protein family HMM PF07690 DNA sequence : GTGATCACCAAAGACACCACTGTCGTCAACGACACGGACGTGGATCGTGGCATCCCCAACGCGTCGTGGGGCCTCATCAA GGACCACACCTTGCAGTTGCGTGACGGATACCTGAATCGCACCCCATTCTTCCAATTCATTCTGCTGTCGATATGTTTCC CGATGTGGGGAATGGCGGCGAGCATGAACGACATCCTCATCACCCAATTTAAGGCTGTGTTTGCTCTTTCGGATCTTGCT AGTGCATTCGTGCAGTCAGCCTTTTACGGCGGCTATTTCCTTATCGCCATACCTGCGAGCCGAGTAATTCGTCGCACCAG CTACAAGACGGGCCTGCTCATTGGTTTGAGTGTGTACATTCTCGGATGCCTGTTGTTTTTCCCGGCTTCGCGTGTGGCTA CGTATACGGTATTCTTAGCTGCCCTGTTTTCCATCGCCGTTGGCTTGTCTTTCTTGGAGACTTCAGCGAACACATATTCG TCGATGATCGGTGATCGGAAACATGCAACTCTGCGCCTTAATATTTCTCAGACATTCACGTCGTTGGGATTCTTGGGTGG GGCCCTCATGGGAAAATTCCTCGTGTTCACCGACGGCGCTGCGCTGCACGAGCGCGTAGCCCGCGCCCACACGGTGGCTG AGCGCGAGGCTATCACCGCCGAAGCGTTGGGGCGTACGCTCGATCCCTACAGGATTATCATCATTATGTTGATAGTGCTC GTGGTGCTCATCGCCATCACCCAGTACCCGCACTCCAAGCCGTTGCGCAACGACGCGGAAGAAGCCAAAGCCCCCATCGG TGAAACTCTTGCATACCTAGCGAAGAACCGTTTGTTCCGTGCTGGAATTTTTACACAGTTCCTCTATGTGGGCTTGCAGA CGTCATTATGGACCTTCACCATCCGGCTGGCTTTGAATCTTGATCCGGCATTAAATGAGCGTACTGCCGCGAACTATTTG ATTGCTGCATTCATTTCTTTCTTCCTTGGAAAAACCATCGCCAACCTGCTCATGACCCGAATGAGCGAGAACGGCATTCT CATGGCGTATTCGTTGCTCGGAGTGTTATGTATCACTTACATCGTCGTGGTGCCAAGCTTCACAACCGTCTATGCAGCGG TGATCGCCTCGGCGCTGTTGGGGCCGGGATGGGCGACGATCTTCGCACGAAACCTTGACCTCATCGAGGACAAGCGCTAC ACCGAGACTGGCGGTGCGATCATCATTATGTCGATCATCGGTGGTGCTGCCATTCCAGTAGTGCAGGGCTTCCTGTCCGA CACCACAGGATCCATGAGACTCAGTTTTATCGTAAACGCCTTCTGCTTCACCGCGATCTTCGTGTTCTTCTTAGTCGTCG ATCGTCGCGATCAGAAACAAATCTGTGACATCGCACCTGCTGCTCTGAAGGAGGCCCCTCATGCCAACCACTGA Protein sequence : MITKDTTVVNDTDVDRGIPNASWGLIKDHTLQLRDGYLNRTPFFQFILLSICFPMWGMAASMNDILITQFKAVFALSDLA SAFVQSAFYGGYFLIAIPASRVIRRTSYKTGLLIGLSVYILGCLLFFPASRVATYTVFLAALFSIAVGLSFLETSANTYS SMIGDRKHATLRLNISQTFTSLGFLGGALMGKFLVFTDGAALHERVARAHTVAEREAITAEALGRTLDPYRIIIIMLIVL VVLIAITQYPHSKPLRNDAEEAKAPIGETLAYLAKNRLFRAGIFTQFLYVGLQTSLWTFTIRLALNLDPALNERTAANYL IAAFISFFLGKTIANLLMTRMSENGILMAYSLLGVLCITYIVVVPSFTTVYAAVIASALLGPGWATIFARNLDLIEDKRY TETGGAIIIMSIIGGAAIPVVQGFLSDTTGSMRLSFIVNAFCFTAIFVFFLVVDRRDQKQICDIAPAALKEAPHANH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85172.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 9e-99 | 53 |
| deoP | ADD91723.1 | permease DeoP | Not tested | PAI-I AL862 | Protein | 2e-98 | 52 |
