Gene Information

Name : rbsK (HMPREF0675_4276)
Accession : YP_003581435.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : 2.7.1.15
Position : 1321811 - 1322725 bp
Length : 915 bp
Strand : -
Note : identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152

DNA sequence :
ATGGATATCGCCGTTGTTGGGTCCAATATGGTGGACCTCATCTCCTACATTCATCGCATGCCATCAGACGGTGAAACCGT
CGAGGCTCCCGAATTCCGAATGGGATGCGGCGGCAAAGGTGCGAATCAGGCAGTAGCTGCGTCACGTCTCGGTGCAGAGG
TCGTGATGGTCACCCGAGTGGGCAACGATGTGTTCGCCGACACCACGTTGGACAACTTTCGCAAAAACGGTATCGATACT
ACCCATGTGTTGCGTACCGATGCGAGCTCCGGGGTGGCACCGATCTTCGTCGATCCAGAATCGCGTAACTCCATCCTCAT
CATCAAGGGAGCTAACGCTCAGCTGAGTCCTGCTGATGTCGAGGGTGCCCGACAAGACATTGCCACGTGCAAACTCATCA
TGCTGCAGCTGGAGATTCCGTTGGAGACGGTCTACGCCACGATTGAGTTAGGGGACGTACTGGGGATCCCAATACTCCTC
AATCCGGCTCCGGTCGCACCAGAATTGGATCTTGAGCGAATCCGCGGAATTGAGTTCTTCATGCCGAACGAGTCCGAGCT
TGAACTCATAACGGGGATGCCAGTAGACACCCTCGATGATATCGGCAAGGCTACTGATGTGCTGCTGGGAGCGGGCATCA
CGAATATCATCGTAACTTTGGGCTCGCGTGGTGCGATGTGGGCCCACGCAGAAGGACGCAAAATCATCAAGGCCCCGGTT
GTTCAAGCCGTGGACACGACAGGTGCTGGCGATGCCTTCATAGGCTGCTTTGCTAAAGAATGGGTAGATCACGGCGACGT
GATAGCTGCGATTCGTGCAGGAAACAGGTATGCGGCTGACTCGGTCACACGCCACGGAACTCAGAGCTCGTATGCCTTGG
CCGATGGAAGTCTCCCGGAGTGGCTGAGATCATAG

Protein sequence :
MDIAVVGSNMVDLISYIHRMPSDGETVEAPEFRMGCGGKGANQAVAASRLGAEVVMVTRVGNDVFADTTLDNFRKNGIDT
THVLRTDASSGVAPIFVDPESRNSILIIKGANAQLSPADVEGARQDIATCKLIMLQLEIPLETVYATIELGDVLGIPILL
NPAPVAPELDLERIRGIEFFMPNESELELITGMPVDTLDDIGKATDVLLGAGITNIIVTLGSRGAMWAHAEGRKIIKAPV
VQAVDTTGAGDAFIGCFAKEWVDHGDVIAAIRAGNRYAADSVTRHGTQSSYALADGSLPEWLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 5e-69 57
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 6e-69 57
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 5e-63 55