Gene Information

Name : HMPREF0675_4075 (HMPREF0675_4075)
Accession : YP_003581239.1
Strain : Propionibacterium acnes SK137
Genome accession: NC_014039
Putative virulence/resistance : Unknown
Product : C4-dicarboxylate anaerobic carrier
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 1101626 - 1103167 bp
Length : 1542 bp
Strand : +
Note : identified by match to protein family HMM PF03600; match to protein family HMM PF03606

DNA sequence :
TTGTCTAGTAACGATGCTATCGAGGCCCGCCATCGTCTACGGGTTCCCTCGGCTTTTACCATCCTTTTTGTACTGACGGT
GCTAGCTGTTGTCTGTACCTGGTTTATTCCGGCGGGGAGTTACTCAAAGATGAGTTACGCCGCTGGCTCTAACCAGTTGG
TCATTGTGGACCCGAATGGAGCAACGACGAAGCATACCGCAACTCAGGCGACTCTCGACAAGTACGGTGTCGCAATGAAG
ATCTCGGAATTTACATCGGGATCAATAACGGGATCAGTGTCAGTGCCAGGCACCTATGAGCGGGTCGCTTCTCACCCCGC
AGGCATTGGGGATATCACTAGCGGGATGGTGACCGGCACGATTGAGGCCGTCGACATTATTGTCTTCATTCTCGTTTTGG
GCGGACTCATTGGGGTAGTGAAGGCGAGCGGCGCATTCGAAGCTGGCCTTGGTCGACTTACTGCGAGATCGAAGGGCAAG
GAGTTTTTGCTTGTCCTCTTCGTATCTCTCTTCATGATCGTAGGTGGCACGACCTGTGGACTCGAAGAAGAAGCAGTTGC
TTTCTATCCAATCTTAGCACCGGTATTTATAGTAATGGGATATGATGCTCTCGTTGTTGTGGGCTCAATTTTCCTTGCTG
GATCGATTGGTACCTGCTTCTCGACTATCAATCCGTTCTCCTCTGCAATTGGTGCGAACGCCGCTGGTATCCGGCTTACT
GAAGGGATGACCTGGCGCGTCATTGGACTTGTCGGAGGTGCTATTGCCGTGGTGCTCTATTTGGCGTGGTACTCAAAGAA
GGTCAAGGCCAATCCTGGATTCTCCTATGCGTGGGAAGACCGAGAAGCTTTCGCAGCCCAGTGGTCGCTAGGTAATGACG
GTGCTGAGATCGGTTTCGACTGGCGGCGTAAGGTTATCCTGTTCCTCTTTGCCGCAGCTTTCCCGATTATGGTCTGGGGA
GTCATGGCTCGAGGCTGGTGGTTCCCAGCTATGGCTTCGTCCTTTCTTGCTATTACGATTATTATCATGCTTATTGCCGC
TACGGGGACGAACAAGCTCAGTGAGAAAGAATTGGTCGACTCCTTTAGTGCAGGGTCATCTAGCCTTGTTGCTGTCTCTC
TCATTATTGGCTTGGCGCGTGGGATTAACCACATTCTCAATGAAGGATTGATTTCTGACACGTTGCTGTATGAGTCGGCA
AAGGTCGTCTCTCATGTCAGCGGTCCGGTCTTTGTACTGTCCTTGCTGATCGTATTCTTTTTGCTCGGCTTCATCGTGCC
GTCATCGTCAGGACTGGCAGTCTTGGCCTTGCCGATCATGGCGCCGCTAGGAGACACCGCAGGAGTCTCGCGGGCTACTG
TGCTGTGTGCGTATCAGTGGGGTCAGTACGCGATGCTCTTCTTGGCGCCTACTGGCCTGGTAATGGCAACCCTGCAGATG
CTGGACATTAAGTACTCACACTGGCTGAAGTTCGTGTGGCCGTTGGTGGTGTTTGTCCTCGTCTATGGCGGGATACTGCT
CGTGCTTCAGACGGTGGTGTGA

Protein sequence :
MSSNDAIEARHRLRVPSAFTILFVLTVLAVVCTWFIPAGSYSKMSYAAGSNQLVIVDPNGATTKHTATQATLDKYGVAMK
ISEFTSGSITGSVSVPGTYERVASHPAGIGDITSGMVTGTIEAVDIIVFILVLGGLIGVVKASGAFEAGLGRLTARSKGK
EFLLVLFVSLFMIVGGTTCGLEEEAVAFYPILAPVFIVMGYDALVVVGSIFLAGSIGTCFSTINPFSSAIGANAAGIRLT
EGMTWRVIGLVGGAIAVVLYLAWYSKKVKANPGFSYAWEDREAFAAQWSLGNDGAEIGFDWRRKVILFLFAAAFPIMVWG
VMARGWWFPAMASSFLAITIIIMLIAATGTNKLSEKELVDSFSAGSSSLVAVSLIIGLARGINHILNEGLISDTLLYESA
KVVSHVSGPVFVLSLLIVFFLLGFIVPSSSGLAVLALPIMAPLGDTAGVSRATVLCAYQWGQYAMLFLAPTGLVMATLQM
LDIKYSHWLKFVWPLVVFVLVYGGILLVLQTVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 1e-125 61
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 1e-124 61
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 1e-124 61
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 4e-125 61
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 4e-125 61
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 2e-125 61