Gene Information

Name : RCAP_rcp00048 (RCAP_rcp00048)
Accession : YP_003579713.1
Strain :
Genome accession: NC_014035
Putative virulence/resistance : Virulence
Product : iron siderophore/cobalamin ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.-
Position : 33343 - 34104 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
ATGACCATCGCCGCCCGCAATCTGACCTGGGGCATCCGCAAGCGGACCATCGTCGCGGATGTCTCGCTTGATGTGGCGCG
GGGCGAGACGCTGGGCCTGATCGGGCCGAACGGCTCGGGCAAGTCCTCGCTGCTGCGGCTGCTTGCCGGGTTGAAGCGCC
CGCAGGCCGGTTTCGTCGAGATCGAGGGGCAGGATATCGCGCGCCTCCCGCGCCGGGCGCTGGCGCGGCAGCTGGCCTTC
GTCCGGCAAAGCGCCGCGACCGACAGCAATGTCTCGGTCCGCGACGTGGTGCGGCTGGGGCGGACGCCGCACCGCTCCGC
CCTCTCGGGCTGGTCGGCGGAGGACGAGGCGGCGGTCACCTCGGCGCTGGCCCGCGTCGACATGGAGGGGCGCCGCGCGC
AGCCCTGGCAGACCCTCTCGGGCGGCGAGAAGCAGCGGGTCCACATCGCCCGGGCATTGGCCCAGGCGCCGCGCATCCTG
TTTCTTGACGAGCCGACCAACCATCTCGACATCCATCATCAGATCGCGATCCTGCGCATGGTGCGCGAGCTTGATCTGAC
AAGCATCATCGCGCTGCATGACATGAACCTCGCCGCGATGTTCTGCGACCGGATCGTCGTGCTGGAGGCGGGCCGTGTCG
TGGCCTGCGGCACGCCCGAGGCCGTGTTGACCGCCGAGCTGCTGCGCGCCGTGTTCCGGGTGGAGGCAGAGATCGCCACC
TCGACAACGGCCGGGCCGCCGCATATCCGTTTCCGCGCCTGA

Protein sequence : 
MTIAARNLTWGIRKRTIVADVSLDVARGETLGLIGPNGSGKSSLLRLLAGLKRPQAGFVEIEGQDIARLPRRALARQLAF
VRQSAATDSNVSVRDVVRLGRTPHRSALSGWSAEDEAAVTSALARVDMEGRRAQPWQTLSGGEKQRVHIARALAQAPRIL
FLDEPTNHLDIHHQIAILRMVRELDLTSIIALHDMNLAAMFCDRIVVLEAGRVVACGTPEAVLTAELLRAVFRVEAEIAT
STTAGPPHIRFRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-31 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 9e-33 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcp00048 YP_003579713.1 iron siderophore/cobalamin ABC transporter ATP-binding protein BAC0164 Protein 1e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcp00048 YP_003579713.1 iron siderophore/cobalamin ABC transporter ATP-binding protein VFG1042 Protein 9e-32 42