Gene Information

Name : RCAP_rcc00651 (RCAP_rcc00651)
Accession : YP_003576823.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 717632 - 718285 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTCTGCTTCTGGTCGAAGATACCGCCGATCTGGCCGAGACCCTTGCGCGCCATCTGCGCGCCGAGGGCCATGCCGT
CGATCTGGCGACCGATGTCGAGGGCGCGCGCACGGCGCTGGCGGTCAGCGACTATGCCTGCGTGATCCTGGATCTGGGCC
TGCCCGACGGTTCGGGGCTGGCGGTGCTGCGCGACTGCCGCGACCGTGGCGACCGCACGCCGGTCATCATCGCCACCGCC
CGCGACCAGATTTCCGACCGTATCGCGGGGCTGGATGCCGGGGCCGATGATTACGTGGTCAAGCCCTTCGATCTGAACGA
ATTGTCCGCCCGCATCCGGGCCCATGCCCGGCGCGCGCAGGGCGTGCCCGAGGCGCGGATCGTGCTGGGCGAGCTGGAAG
TGGACCGGGCGCTTGCCCGGGTCTGGCGGGCGGGGGCCGAGGTGCGGCTGACGGCGCGGGAATGGGCGCTCTTCGAGGCG
CTTTTGGGCGCGCGCGGCCGGGTTCTGGGCAAATCCGCGCTGGAAGAGGCGCTTTACGCCTTTGACGACCGGATCGAGGG
CAATGCGATCGAGGTCTATGTCTCGCGGTTGCGCGCGAAGCTGGGCCCCGCGGTGATCGAGACCCGGCGCGGTCTGGGCT
ATGTGCTGCCATGA

Protein sequence : 
MRLLLVEDTADLAETLARHLRAEGHAVDLATDVEGARTALAVSDYACVILDLGLPDGSGLAVLRDCRDRGDRTPVIIATA
RDQISDRIAGLDAGADDYVVKPFDLNELSARIRAHARRAQGVPEARIVLGELEVDRALARVWRAGAEVRLTAREWALFEA
LLGARGRVLGKSALEEALYAFDDRIEGNAIEVYVSRLRAKLGPAVIETRRGLGYVLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcc00651 YP_003576823.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-26 42
RCAP_rcc00651 YP_003576823.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-29 42
RCAP_rcc00651 YP_003576823.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcc00651 YP_003576823.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-27 42
RCAP_rcc00651 YP_003576823.1 winged helix family two component transcriptional regulator VFG0473 Protein 8e-34 41