|
Name : deoA (RCAP_rcc00445) Accession : YP_003576617.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 477835 - 479154 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGGATGCCCGCTCGATCATCATGGCGGTGCGGGACGGCGCCGGGCTGTCGCCCGAGGCGGCCCTCTGGTTCGCGCGCGG TCTGGCCGATGGCACGGTGTCCGACGCGCAGGCCGGGGCATTCGCGATGGCGGTTCTGTGCCGCGGCATCGGGCCCGGCG GTCGGGTGGCGCTGACGCAGGCGATGCGGGATTCGGGGCAGGTGGTGCGCTGGGATCTGCCCGGCCCGGTCGTCGACAAG CATTCGACGGGCGGCATCGGCGATTCCGTGTCCCTGCTTCTGGCCCCGGCGCTGGCGGCCTGTGGCGTCTATGTGCCGAT GATTTCCGGGCGCGGTCTGGGCCATACCGGCGGCACGCTGGACAAGATGGAGTCCATCCCCGGCTACAAGTCGCTGCCCG GCGTCGCGGTGCTGCGCAAGGTCGTGGCCGAGGTCGGCTGCGCCATCATCGGCGCGACCGAGGAAATCGCCCCGGCCGAC AAGCGGCTTTACGGCATCCGCGACATCTCGGGCACGGTCGAAAGCATCGATCTGATCACCGCCTCGATCCTGTCGAAGAA ACTGGCGGTCGGGCTTGATGCGCTGGTGCTCGATGTCAAGGTCGGCTCGGGTGCCTTCATGGCGACGGTGGAAGACGCGC AGGCGCTGGCCGAAAGTCTGGTGAAGACGGCGAATGATGCGGGGGTCCGGACCTCGGCCTTGATGACCGACATGAACCAG AGCCTGGGGCAATCGGCGGGCAATGCGCTTGAAGTGCTCGAGGTGATGGAGACGCTGACCGGCACCTCGGTCAACGAGGC GCTTTGGGATGTGACCTCGGCCTTGGGCGGCGAGGTGCTGATGCTGGCGGGCAAGGCGGCAAGTCTGGACGATGGCGCCG CGCGGATCGATGCGGCGATCGAAAGCGGCCGCGCCGCCGAGATCTTCGGGCGGATGGTGGCAGCCTTGGGCGGGCCGGTC GATTTCGTCGAACGCTACCCCGACCGGCTTCCGGCCGCGCCGCTGATCGTGCCGGTGCCCGCGCCGCGGGCGGGCTTTGT CGCCCGGGTGAACGGGCGGGCCCTGGGCGAGGCGGTGGTGCGGCTGGGCGGCGGGCGGCTGGTCGGTTCGGACCGGATCA ACCCCTCGGTCGGGCTGACCGGGCAGGCGATGATCGGCGCGGAAATGGCCCGCGGCGAGGCGCTGGCGCTGATCCATGCC CCCGATCAGGCCCGCGCCGATCAGGCGGTGGCGGCGGTTCTGGCAGCCTATCAGATGTCGGAGGATCCGCCCGAGGAACC GCCGCTGATCCATTGCCGGATCGGACCGGAGGAGGTGTGA Protein sequence : MDARSIIMAVRDGAGLSPEAALWFARGLADGTVSDAQAGAFAMAVLCRGIGPGGRVALTQAMRDSGQVVRWDLPGPVVDK HSTGGIGDSVSLLLAPALAACGVYVPMISGRGLGHTGGTLDKMESIPGYKSLPGVAVLRKVVAEVGCAIIGATEEIAPAD KRLYGIRDISGTVESIDLITASILSKKLAVGLDALVLDVKVGSGAFMATVEDAQALAESLVKTANDAGVRTSALMTDMNQ SLGQSAGNALEVLEVMETLTGTSVNEALWDVTSALGGEVLMLAGKAASLDDGAARIDAAIESGRAAEIFGRMVAALGGPV DFVERYPDRLPAAPLIVPVPAPRAGFVARVNGRALGEAVVRLGGGRLVGSDRINPSVGLTGQAMIGAEMARGEALALIHA PDQARADQAVAAVLAAYQMSEDPPEEPPLIHCRIGPEEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-43 | 44 |
