|
Name : gabD (RCAP_rcc00413) Accession : YP_003576585.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 440883 - 442361 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGCTCGACACCGTCACCAATCTGAAATCGCTGCTCAAGGACCCGAGCCTTCTTGTGACCAAGGCCCTCGTCGCGGGGGA CTGGGTCGATGCCGATGACGGCAAGACCTTCGCGGTGACGAACCCCGCCCGCGGCGACGTGATCTGCACCGTGCCGGACC TGAGCCGCGCCGAAACCGCCCGCGCCATCAAGGCCGCCGAGGTCGCGATGAAGGACTGGGCCGCCCGCACCGGCAAGGAA CGCGCGGCGGTGATGCGCAAATGGTTCGAGCTGATGATGGCGAACCAGGAAGACCTCGCGCTGATCCTGACCGCGGAAAT GGGCAAGCCGCTGGCCGAAGCCCGCGGCGAGATCGCCTATGGCGCTTCCTTCATCGAATGGTTCGGCGAGGAAGCCAAGC GCATCTACGGCGAGACGATCCCGGGCCACATGCGCGACAAGCGCATCACCGTGCTGAAACAGCCGATCGGCGTCGTGGGC AGTATCACGCCCTGGAACTTCCCGAATGCGATGATCGCCCGCAAGGCCGGCCCTGCCATCGCCGTGGGCTGCGGCTTCGT CTGCCGTCCGGCCTCGGAAACGCCGCTTTCGGCGCTGGCGATGGGGCTTTTGGGCGAACGCGCCGGGCTGCCGAAGGGGA TTCTCTCGGTCATCACCTCCTCGCGCGCCTCCGACATCGGCAAGGAATTTTGCGAAAATCATGCGGTGCGGAAGCTGACC TTCACCGGGTCCACGGAAGTCGGGCGCATCCTGATGCGGCAGGCGGCGGAGCAGGTGATGAAATGCTCGATGGAGCTGGG CGGCAACGCGCCCTTCATCGTTTTCGACGACGCCGATCTGGATGCGGCGGTCGAGGGCGCGATGATGTCGAAGTTCCGCA ACAACGGCCAGACCTGCGTCTGCGCGAACCGGATCTATGTGCAGGCGGGCGTCTATGACACTTTCGCGGAAAAGCTGGCG GCGGCGGTGCGCAAGCTCAATGTCGTCGACGGGCTGAAGGACGGCGTGACCACCGGGCCCTTGATCTCGGCCGATGCGGT CGAGAAGGTCGAGGAACATATCGCCGATGTGGTGGCGGGCGGCGGCACCATCGTCACCGGCGGCGCGCGGCATGAACTGG GCGGCACCTTCTTCCAGCCGACCGTCGTCACCGGCGTCACGCAGGAGATGAAAGTGGCGACCGAGGAAACCTTCGGCCCG GTGGCGCCGCTCTTCAAATTCGAGACCGAGGCCGAGGTGATCGAAAAGGCCAATGCCACGATCTTCGGTCTGGCCTCCTA TTTCTATGCCCGTGACATCGGCCGGATCACCCGGGTGCAGGAAGGGCTGGAATACGGCATCGTCGGCGTGAACACCGGCA TCATCTCGACCGAGGTGGCGCCCTTTGGCGGCGTCAAGCAATCGGGCCTCGGGCGCGAGGGCAGCCATCACGGCGTCGAA GACTACCTTGAACTGAAATACATCTGCCTCTCGATCTGA Protein sequence : MLDTVTNLKSLLKDPSLLVTKALVAGDWVDADDGKTFAVTNPARGDVICTVPDLSRAETARAIKAAEVAMKDWAARTGKE RAAVMRKWFELMMANQEDLALILTAEMGKPLAEARGEIAYGASFIEWFGEEAKRIYGETIPGHMRDKRITVLKQPIGVVG SITPWNFPNAMIARKAGPAIAVGCGFVCRPASETPLSALAMGLLGERAGLPKGILSVITSSRASDIGKEFCENHAVRKLT FTGSTEVGRILMRQAAEQVMKCSMELGGNAPFIVFDDADLDAAVEGAMMSKFRNNGQTCVCANRIYVQAGVYDTFAEKLA AAVRKLNVVDGLKDGVTTGPLISADAVEKVEEHIADVVAGGGTIVTGGARHELGGTFFQPTVVTGVTQEMKVATEETFGP VAPLFKFETEAEVIEKANATIFGLASYFYARDIGRITRVQEGLEYGIVGVNTGIISTEVAPFGGVKQSGLGREGSHHGVE DYLELKYICLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-140 | 61 |
