|
Name : fliI (RCAP_rcc03521) Accession : YP_003579652.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Virulence Product : flagellar protein export ATPase FliI Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 3725708 - 3727030 bp Length : 1323 bp Strand : + Note : - DNA sequence : ATGGCGTTGAACGGACTCGAACGGCTGCAGGCGGAAATCGCGGATCTGGGGGCAGTGCACCCGGTCGGGCGGGTTTTCGA AGTGGGCAAGGGCACGATCGAGGTCAGCGGCCTGACCACGCGGGCGACGCTGGGCGACAGGGCGCGAATCCATGCCCAGT CCGGCCCGGTCTTCGGCGCCGAGGTGATCGCGCTGCGCCGGGGCGCGGTGACGCTGCTGGCCGATTGCGCGGTCGAGGGC GTGGCCATCGGCGATCGCGTCGAGGTGCTGGGCCAGGCCGGAATCGCCCCCGACGACAGCTGGATCGGGCGCATCGTCGA TCCTTTCGGACGGCCGCTGGATGGCCGCCCGCTGCTGCGCGGCGGTCACGACCGCAACATCCGCGCCACCCCCCCGCCCG CCGCCTTCCGCCGCCGTCTGGGCGAGCGGGTCGAGACCGGGCTTGATGCGTTCAACACGCTGTTGCCGCTGGTGCGCGGG CAGCGCATCGGCCTCTTTGCGGGCTCGGGCGTCGGCAAATCCTCGCTGCTGGCGAAATTCGCCAAGGGGGTCGCGGCCGA TGTCGTGGTGATCGCCCTGATCGGCGAGCGCGGCCGCGAGCTGCGCGAATTCGTCGAAAAGACGCTGGGACCGGAGGGCA TGGCGCGGTCGGTGATCGTCGCGGCGACCTCGGACCAGTCGCCTCTGGTCCGGCGCCGCTGCGGCTGGGCGGCGATGACG GTGGCCGAATACTTCCGCGATCAGGGCAAGCATGTGCTGTTTCTGGCCGACAGCGTGACCCGCTTTGCCGAGGCGCATCG CGAAGTGGCGCTGGCGGCGGGGGAACCGCCCAGCCTGCGCGGCTATCCGCCCTCGACCTCGCATCAGATCATGTCGCTGG CGGAACGGTCGGGCCCCGGGATGGAGGGGGCCGGAGACATCACCGCGGTATTTTCGGTGCTGGTGGCGGGATCGGACATG GAAGAGCCGGTGGCCGACATCCTGCGCGGCACGCTTGATGGCCACGTGGTGCTGGATCGCGGCATCGCCGAACGCGGCCG ATTCCCGGCCATCGATCTGCTGCGTTCGGTGTCGCGGTCGCTGCCGGAGGCTGCAACCCCGGCCGAAAACGAGCTGATCG CCAAGGCGCGCAAGCTTCTGGGTGCCTATGACCGGGCCGAGATGATGATCCAGGCGGGTCTTTATGCGGCAGGCAGCGAT CCGGTGATCGACGCCGCGATCAAGGTCTGGCCCGCGCTGGACGGGTTTCTGGCCCGCGATGCGGCCGATGGCACGCGTTC GAGCTTTTCGCGGCTCAGCCTCGCGCTGGCAGCTGCCGGGTGA Protein sequence : MALNGLERLQAEIADLGAVHPVGRVFEVGKGTIEVSGLTTRATLGDRARIHAQSGPVFGAEVIALRRGAVTLLADCAVEG VAIGDRVEVLGQAGIAPDDSWIGRIVDPFGRPLDGRPLLRGGHDRNIRATPPPAAFRRRLGERVETGLDAFNTLLPLVRG QRIGLFAGSGVGKSSLLAKFAKGVAADVVVIALIGERGRELREFVEKTLGPEGMARSVIVAATSDQSPLVRRRCGWAAMT VAEYFRDQGKHVLFLADSVTRFAEAHREVALAAGEPPSLRGYPPSTSHQIMSLAERSGPGMEGAGDITAVFSVLVAGSDM EEPVADILRGTLDGHVVLDRGIAERGRFPAIDLLRSVSRSLPEAATPAENELIAKARKLLGAYDRAEMMIQAGLYAAGSD PVIDAAIKVWPALDGFLARDAADGTRSSFSRLSLALAAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-59 | 46 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-56 | 44 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-56 | 44 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 8e-57 | 44 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 4e-56 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-56 | 44 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 2e-51 | 43 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-55 | 42 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 3e-58 | 42 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 3e-58 | 42 |
| escN | YP_003236088.1 | translocator EscN | Virulence | LEE | Protein | 7e-57 | 42 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 1e-56 | 42 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 1e-56 | 42 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 1e-56 | 42 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 1e-56 | 42 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 4e-56 | 42 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-64 | 41 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-64 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-55 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 8e-57 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 9e-57 | 41 |
| escN | AAK26715.1 | EscN | Virulence | LEE | Protein | 4e-56 | 41 |
| escN | YP_003232153.1 | T3SS structure protein EscN | Virulence | LEE | Protein | 6e-56 | 41 |
| escN | AAL57542.1 | EscN | Virulence | LEE | Protein | 4e-56 | 41 |
| escN | CAC81862.1 | EscN protein | Virulence | LEE II | Protein | 3e-56 | 41 |
| escN | CAI43874.1 | EscN protein | Virulence | LEE | Protein | 3e-56 | 41 |
| escN | YP_003223475.1 | translocator EscN | Virulence | LEE | Protein | 4e-56 | 41 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 1e-56 | 41 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-46 | 41 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 8e-46 | 41 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-46 | 41 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 8e-46 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG2331 | Protein | 1e-64 | 46 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0515 | Protein | 5e-57 | 44 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG2499 | Protein | 9e-67 | 44 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0192 | Protein | 3e-56 | 44 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0048 | Protein | 1e-64 | 42 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0812 | Protein | 6e-57 | 42 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG2144 | Protein | 4e-60 | 41 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG1254 | Protein | 4e-65 | 41 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0730 | Protein | 7e-57 | 41 |
| fliI | YP_003579652.1 | flagellar protein export ATPase FliI | VFG0555 | Protein | 3e-46 | 41 |
