Gene Information

Name : rph (RCAP_rcc03492)
Accession : YP_003579623.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3698984 - 3699697 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCCCTCTGGCCGCAATCTTGCCGATATCCGTTCCATTTCCATCGAAACCGGCGTGACGAAACATGCCGAAGGCTC
GGTGCTGATCAAGATGGGGGACACCCATGTTCTGTGCACCGCGACGATCGAGGACAAGGCGCCCTCGTTCCTCAAGGGCT
CGGGCCTTGGCTGGGTGACGGCGGAATACGGGATGCTGCCGCGCGCGACGAATTCGCGCAACCGCCGCGAGGCGGCGGCG
GGCAAGCAATCGGGCCGCACGCAGGAAATCCAGCGTCTGATCGGCCGCGCCTTGCGGGCGGGGATCGACCGCTCCGCGCT
GGGCGAGCGGCAGATCGTGGTGGATTGTGACGTGCTGCAGGCCGATGGCGGCACCCGTTGCGCCTCGATCACCGGCGGTT
GGGTGGCGCTGCGTCTCGCCGTGAACAAGCTGCTGAAATCGGGGCTGATCGTGTCGGACCCGATCATCGATCATGTCGCG
GCGATTTCCTGCGGCATCTATGCCGGTCAGCCGATCGCCGATCTGGATTACGCCGAGGACAGCGAGGCCGGCGTGGACGG
CAACTTCATCCTGACCGGGCGCGGCCGTCTGGTCGAGGTGCAGATGACCGCCGAGGGCTCGACCTTCTCGCGCGAAGAGA
TGACGAAATTGCTCGATCTGGCCGAGGCCGGGGTGGCGCAGCTCGTCGCGGCGCAAAAGGCGGCGATCGCATGA

Protein sequence :
MRPSGRNLADIRSISIETGVTKHAEGSVLIKMGDTHVLCTATIEDKAPSFLKGSGLGWVTAEYGMLPRATNSRNRREAAA
GKQSGRTQEIQRLIGRALRAGIDRSALGERQIVVDCDVLQADGGTRCASITGGWVALRLAVNKLLKSGLIVSDPIIDHVA
AISCGIYAGQPIADLDYAEDSEAGVDGNFILTGRGRLVEVQMTAEGSTFSREEMTKLLDLAEAGVAQLVAAQKAAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-47 51