Gene Information

Name : fliP (RCAP_rcc03479)
Accession : YP_003579610.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3687749 - 3688471 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGTTCTTGCCCTTGCATTAACGTTAATGATCCTTGCGGCGCCCGCGGGCGCGCAGGAGATCACGCTCGACATGGG
CGGGAACGGAAGCCTGACGAATTCCTCGCTGATCCTGATCGCGGGGATCACGCTTCTGAGCCTTGCGCCGGGGCTGGCGA
TCATGGTGACGTGTTTTCCCTTCATCGTCACCGTGCTCTCGATCCTGCGCCAGGCAATGGGGCTGCAGCAATCGCCGCCG
AACATGCTGATCATCAGCCTGGCGCTGTTTCTCACCTGGTTCGTGATGGAGCCGACCTTCATGGCCAGCTATCAGGCCGG
GATCGAGCCGCTGATCGCGCAAAAGATCGACATCGTCACCGCCTTTGAACGCGGCGTCGAGCCGTTCCGCATCTTCATGG
CGGGCCGCACCGATCCCGAGACCTTCACCCAGCTCGCCGCGATCCGCGAAGGCGCGACCTACACCGGCACCGCGCGCGAG
GCGCCGCTGTCGATCCTCGTGCCCTCGTTCATGCTCTCCGAGATCACCCGCGCCTTCGAGATCGGCTTTCTGGTCTTCCT
GCCGTTCCTGATCATCGACCTTGTCGTCTCGGCGATCCTGATGTCGATGGGGATGATGATGGTGCCGCCCGCCGTCGTGG
CCCTGCCGTTCAAGCTGGCCTTCTTCGTGGTGGCGAACGGCTGGGTTCTGCTTTCGGGCGCGCTGGTGCGCAGTTATTCC
TGA

Protein sequence :
MRVLALALTLMILAAPAGAQEITLDMGGNGSLTNSSLILIAGITLLSLAPGLAIMVTCFPFIVTVLSILRQAMGLQQSPP
NMLIISLALFLTWFVMEPTFMASYQAGIEPLIAQKIDIVTAFERGVEPFRIFMAGRTDPETFTQLAAIREGATYTGTARE
APLSILVPSFMLSEITRAFEIGFLVFLPFLIIDLVVSAILMSMGMMMVPPAVVALPFKLAFFVVANGWVLLSGALVRSYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-25 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 7e-25 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-25 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003579610.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-36 46
fliP YP_003579610.1 flagellar biosynthetic protein FliP VFG2338 Protein 5e-34 43
fliP YP_003579610.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-36 42
fliP YP_003579610.1 flagellar biosynthetic protein FliP VFG1259 Protein 3e-35 41