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Name : clpB (RCAP_rcc03406) Accession : YP_003579537.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3606446 - 3609061 bp Length : 2616 bp Strand : + Note : - DNA sequence : ATGAACATGGAGAAGTTCACGGAACGGTCGCGCGGCTTCCTGCAGGCGGCGCAGACGATCGCGATGCGCGAGGGCCATCA GCGGGTGGTGCCCGAACATCTGCTCAAGGCGCTGATGGATGACGATCAGGGGCTTTCGGCCAATCTGATCAAGCGCGCCG GGGGCGAGCCCGCCCGGGTGCAGGAAAGTGTCGATCTGTTCGTCTCGAAGCTGCCGAAAGTCTCGGGCGGCGACGGACAG GTCTATGTCGAACAGGCGCTGGTGCGGGTTCTGGACGAGGCCGAGAAACTGGCAAAGAAAGCGGGCGACAGCTTCGTTCC GGTGGAGCGGATGCTGATGGCCTTGGCGATGGTGAACACCCGCGCCAAGGATGCGCTCGATGCGGGCGCGGTGACGGCGC AAAAGCTGAACACCGCGATCAACGACATCCGCAAGGGCCGCACCGCAGACAGCGCCAATGCCGAGCAAGGCTATGATGCG CTGAAGAAATATGCCCGCGACCTGACCGCGGCCGCCGAGGAAGGCAAGATCGATCCGATCATCGGCCGCGACGATGAAAT CCGCCGCACCATGCAGGTGCTGTCGCGTCGTACCAAGAACAACCCGGTGCTGATCGGGGAACCCGGCGTGGGCAAAACCG CCATTGCCGAGGGGCTGGCGCTTCGCATCATCAACGGCGACGTGCCCGAAAGCTTGCGCAACAAGAAACTCCTCGCGCTC GACATGGGCGCCTTGATCGCGGGCGCGAAATACCGCGGCGAATTCGAGGAACGGCTGAAGGCGATCCTGAAGGAAATCGA GGCCGCGGCGGGGGAAATCATCCTCTTCATCGACGAGATGCACACGCTGGTCGGCGCGGGCAAATCCGAAGGCGCGATGG ATGCGGCGAACCTGATCAAACCGGCGCTGGCGCGGGGCGAGTTGCATTGCGTCGGCGCCACTACGCTCGATGAATACCGC AAATATGTGGAGAAAGACGCGGCCTTGGCGCGGCGGTTCCAGCCGGTGATGGTGAATGAGCCGACGGTCGAGGACACGAT CTCGATCCTGCGCGGCATCAAGGAGAAATACGAGCTGCACCACGGGGTGCGGATCTCCGATTCGGCGCTCGTCGCGGCGG CGACGCTCTCGCATCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGGTCGACGAGGCGGCCTCGCGT CTGCGCATGGAAGTCGACAGCAAGCCCGAGGAACTTGATGCGCTGGATCGCCAGATCCTGCAGATGCAGATCGAGGCCGA GGCGCTGAGACGCGAGGATGACAGCGCCTCGAAGGATCGTCTCGAGAAACTCGAGAAGGATCTGGCCGATGTGCAGCAGC GCGCTGCCGAGATGACGGCGAAATGGCAGGCCGAGCGGGACATGCTGGAGGCCTCGCGGTCGGTCAAGGAGCAGCTCGAT CAGGCCCGGGCGGCGCTGGAACAGGCCAAGCGCGAGGGCAATTTCGCCAAGGCGGGCGAGCTGCAATATGGCCGCATCCC GGAGCTGGAACGGGTGCTGGCCGAGGCCGAGACCGTGGCCGAGGGCAAGATGGTCGAAGAGGCCGTCCGCCCCGAGCAGA TCGCCGAGGTGGTGGAACGCTGGACCGGCATTCCGACCTCGAAGATGCTCGAAGGCGAGCGCGAGAAGCTCTTGAAGATG GAGGAGGAACTGCACAAGCGGGTGATCGGGCAGGATGCCGCGATCACCGCGGTGGCCAATGCCGTGCGCCGTGCCCGCGC CGGGCTGAATGACGAGAACCGGCCGCTCGGCTCGTTCCTGTTCCTCGGGCCGACCGGGGTGGGGAAGACCGAACTGACGA AGGCGGTCGCGAATTATCTCTTCGACGACGACGCGGCGATGGTGCGGATCGACATGTCGGAATTCATGGAGAAACACTCC GTGTCCCGGCTGATCGGCGCCCCGCCCGGCTATGTCGGCTATGACGAAGGCGGCGTGCTGACCGAAGCCGTGCGGCGGCG CCCCTATCAGGTGGTTCTGTTCGACGAGGTGGAAAAGGCGCATCCCGATGTCTTCAACGTGCTGTTGCAGGTGCTCGACG ACGGCATGCTGACCGATGGTCAGGGCCGCACCGTCGATTTCAAGCAGACGCTGATCGTGCTGACTTCGAACCTCGGAAGC CAGGCGCTCAGCCGCCTGCCCGAGGGCACGGACGGCTCCGAGGCCAAGGCCGAGGTGATGGAGGCGGTGCGGATGCATTT CCGCCCCGAATTCCTGAACCGGCTGGACGAGATGGTGATCTTCGACCGGCTGACGCGCGAGAACATGGACGGGATCGTGA CGGTCCAGCTCAAGCGGCTGGAAGCGCGGCTGGCGCAGCGCAAGATCGCGCTGGCGCTGGACGAAGCGGCGCTGAAATGG CTGGCCGACGAGGGCTACGACCCGGTCTTTGGCGCCCGGCCGCTGAAACGGGTGATCCAGCGCGCGCTGCAGGACCCGCT GGCCGAGCTGATCCTGGCCGGGACGGTGAAGGACGGCGAGACGCTTCCGGTGACCGCCGGTCCCGACGGGCTGGTGGTCG GCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGA Protein sequence : MNMEKFTERSRGFLQAAQTIAMREGHQRVVPEHLLKALMDDDQGLSANLIKRAGGEPARVQESVDLFVSKLPKVSGGDGQ VYVEQALVRVLDEAEKLAKKAGDSFVPVERMLMALAMVNTRAKDALDAGAVTAQKLNTAINDIRKGRTADSANAEQGYDA LKKYARDLTAAAEEGKIDPIIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLLAL DMGALIAGAKYRGEFEERLKAILKEIEAAAGEIILFIDEMHTLVGAGKSEGAMDAANLIKPALARGELHCVGATTLDEYR KYVEKDAALARRFQPVMVNEPTVEDTISILRGIKEKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASR LRMEVDSKPEELDALDRQILQMQIEAEALRREDDSASKDRLEKLEKDLADVQQRAAEMTAKWQAERDMLEASRSVKEQLD QARAALEQAKREGNFAKAGELQYGRIPELERVLAEAETVAEGKMVEEAVRPEQIAEVVERWTGIPTSKMLEGEREKLLKM EEELHKRVIGQDAAITAVANAVRRARAGLNDENRPLGSFLFLGPTGVGKTELTKAVANYLFDDDAAMVRIDMSEFMEKHS VSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGRTVDFKQTLIVLTSNLGS QALSRLPEGTDGSEAKAEVMEAVRMHFRPEFLNRLDEMVIFDRLTRENMDGIVTVQLKRLEARLAQRKIALALDEAALKW LADEGYDPVFGARPLKRVIQRALQDPLAELILAGTVKDGETLPVTAGPDGLVVGGKVSASQRVQTEPRVLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-99 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-104 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-105 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003579537.1 | chaperone ClpB | VFG2076 | Protein | 5e-114 | 43 |
| clpB | YP_003579537.1 | chaperone ClpB | VFG2084 | Protein | 2e-106 | 42 |
