Gene Information

Name : RCAP_rcc03011 (RCAP_rcc03011)
Accession : YP_003579145.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3200945 - 3201604 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTCATCGTGGAAGACGACGCCATTCTGGGGGCCGCGGTGCGCGATCAGGTGGCCGCCGACGGCCATTCGGT
CGATTGGGCGATGCGGCTGGATCAGGCCGCGGATGCGCTGGCGGTGGCGGCCTATGATCTGATCCTGCTCGATCTGATGC
TGCCCGACGGCCGCGGCATTCCGTTTCTGAAAACCCTGCGCACACAGGGGGTTGCGACGCCGGTGATCATTCTGACCGCG
CTTGATCAGGTCTCGGACCGGATCGAGGGGCTGAATGCCGGGGCCGATGATTATCTGGTCAAGCCCTTCGATCTGGCGGA
GCTGACGGCGCGGATCGGCTCGGTGGCGCGGCGCTATGCGGGCAATCCCAATCCGGTCATCCGTCTGGGCGAGCTGACGA
TCGACCTTGCCGCGCGCGAGCTGCGCCGGGCGGGCAAGGCGGTCGCGCTGACGGCGCGGGAATGGGCGCTTTTCGAGCTG
CTTCTGTCCCGCCCCGGGCAGATCTTTCCGAAACGCGACCTCGAGGACCGGCTTTATTCTTTCGACGACGAGATCGGCTC
GAATACTTTGGAAGTGCATGTCTCAAGGCTGCGCAAGAAACTGGGCGCGCAAGTGATCGAGACCGAACGCGGCCTTGGCT
ACCGGCTGGCGCGGCCATGA

Protein sequence : 
MRILIVEDDAILGAAVRDQVAADGHSVDWAMRLDQAADALAVAAYDLILLDLMLPDGRGIPFLKTLRTQGVATPVIILTA
LDQVSDRIEGLNAGADDYLVKPFDLAELTARIGSVARRYAGNPNPVIRLGELTIDLAARELRRAGKAVALTAREWALFEL
LLSRPGQIFPKRDLEDRLYSFDDEIGSNTLEVHVSRLRKKLGAQVIETERGLGYRLARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcc03011 YP_003579145.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCAP_rcc03011 YP_003579145.1 winged helix family two component transcriptional regulator VFG0473 Protein 1e-28 41