Gene Information

Name : aldH2 (RCAP_rcc02448)
Accession : YP_003578585.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2624996 - 2626495 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGACCGATACCACCTTGGCCTATTGGCAGGGGCTTGCCGAAAAGCTGACGCTGCGCACCCGCCACTTCATCGGCGGCGA
CTATCTGCCCTCGGCCGATGGCCGCACCTTCCAGACGATCAACCCGGCCAATGGCGCCGTTCTGGCCGAGGTCGCCCGCG
GCGGTCAGGCCGAGATCGACCGCGCCGTGTCGGTCGCCCGCAAGGTCTTTCGCTCCGGCGTCTGGTCAAAGATGGAGCCG
CGCGCCCGCATGGCGGTGCTGGAGAAATTCGCCGCGCTGATCGAGGCGCATGGCGAGGAATTCGCCGTCCTTGACAGCCT
CGACATGGGCAAGCCGGTGATGGACATGATGAACATCGACGTGCCCTTTTCGGCCACGACGATCAAGTTCTTCGGGGAAT
CGATCGACAAGTTCCACGGTCAGGTGACGGCGACGGCGACGACCGCGCTGCATTACATCCTCAATCAGCCGCTCGGCGTC
GTCGGCATCATCACGCCCTGGAACTATCCGCTGATGATGGCGGCGTGGAAGCTGGGCCCGGCGCTCGCCACCGGCAATTC
GGTGGTGCTGAAACCGGCCGAGCAATCGCCGCTTTCGGCCTGTCTGCTGGCCGAGTTGTTCATCGAGGCGGGCGGTCCGC
CCGGCGTCTTGAACGTTGTCCAGGGTCTGGGCGAGGAGGCGGGCAAGGCGCTGGCGCTGCACATGGATGTCGACAAGATC
GCCTTCACCGGCTCGACCGAGGTCGGCAAGCTTCTGATGATCTATGCCGGTCAGTCGAACATGAAGCGCGTGACGACCGA
ATGCGGCGGCAAGACCCCGCAGATCATTCTGGGCGACTGGGACGATCTGGACACCGCCGCGACCTATGCGGTGAACGGCA
TCTTCGGCAATCAGGGCGAGGTCTGCAACGCGGGCTCGCGCATCCTTGTGGCGCGGGAATTGCACGACGCCTTTGTCGAG
AAATTCATCGCCACGGCAAAGCAGAATTTCATCCTCGGCGACCCGCTCGATCCCGCGACGACGATGGGGCCCTTGGTCAC
CACCGACCAGCAGGCGCGCGTTCTGGGCTATATCGCGAAGGGCCGCGCCGAGGGGGCGGTGCTGGCGCTGGGCGGCGGCA
CGCCTGCGGGCCTGTCGCACGGTGCCTATGTGGAGCCGACGCTGTTCACCGGGGTCAACAATGCCATGACCATCGCGCGC
GAGGAAATCTTTGGCCCGGTCGGCACGATCATTCCGATCGACGGGCTCGAAGACGGGCTCGAAATCGCCAATGACTCGCC
CTATGGGCTGGCCGCTTCGGTCTGGACCCGCGATCTGGCCAAGGCGCATACCTTCGGGCGCGAGATGGAGGCGGGCGTGT
GCTGGGTGAACTGCTTCGATCACGGCGACATGACCTCGCTTTGGGGCGGGTTCAAGCAGACCGGCAACGGTCGCGACAAG
TGTTTCGAGGCGCTGTCGCAATATACCCAGACGAAATCGGTCTGGATCAATCTGGGCTGA

Protein sequence :
MTDTTLAYWQGLAEKLTLRTRHFIGGDYLPSADGRTFQTINPANGAVLAEVARGGQAEIDRAVSVARKVFRSGVWSKMEP
RARMAVLEKFAALIEAHGEEFAVLDSLDMGKPVMDMMNIDVPFSATTIKFFGESIDKFHGQVTATATTALHYILNQPLGV
VGIITPWNYPLMMAAWKLGPALATGNSVVLKPAEQSPLSACLLAELFIEAGGPPGVLNVVQGLGEEAGKALALHMDVDKI
AFTGSTEVGKLLMIYAGQSNMKRVTTECGGKTPQIILGDWDDLDTAATYAVNGIFGNQGEVCNAGSRILVARELHDAFVE
KFIATAKQNFILGDPLDPATTMGPLVTTDQQARVLGYIAKGRAEGAVLALGGGTPAGLSHGAYVEPTLFTGVNNAMTIAR
EEIFGPVGTIIPIDGLEDGLEIANDSPYGLAASVWTRDLAKAHTFGREMEAGVCWVNCFDHGDMTSLWGGFKQTGNGRDK
CFEALSQYTQTKSVWINLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-112 50
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-74 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-76 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH2 YP_003578585.1 aldehyde dehydrogenase VFG0082 Protein 1e-74 41