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Name : oppD2 (RCAP_rcc02278) Accession : YP_003578415.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein OppD Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : 3.6.3.23 Position : 2453190 - 2454782 bp Length : 1593 bp Strand : + Note : - DNA sequence : ATGACCACACCCATTCTGGAGCTGCGCGACATCCATGTGCGCTTTGCCACGCTTGATGGCGCGGTCGAGGCGGTCAGGGG CGTGTCCTTTGCGATCAGGCGCGGCGAAACCGTCGCTGTGGTGGGCGAATCCGGCTCGGGCAAAAGCCAGATCATGATGG GGGTGATGGGGCTTCTGGCGCAAAACGGCCAGATCAGCGGCACGGCCGAATTTCACGGCATGAACCTGATCGGCCTGCCG CGCCGGGCGCTCAACCGCATCCGCGGCGAGCGCATCGCGATGATCTTTCAAGAACCGATGACCTCGCTCGATCCGCTTTT TCCCATCGGCGCGCAGCTGATCGAGCCGCTCTGCCGCCATCAGGGCCTGTCGCGCAAGGCCGCCCATGCCCGCGCCATCG AGCTCTTGCATCTGGTTCAGATCCCCGAGCCCGAGCGGCGGATGCGGTCCTATCCGCATGAACTTTCGGGCGGGCAGCGC CAGCGGGTGATGATCGCGATGGCGATTTCGAACAACCCGGAACTCTTGATCGCCGACGAGCCGACCACCGCGCTGGATGT CACGATCCAGGCCGAGATCCTGACGCTTTTGCGCGATCTGCAGGAGCGGCTGGGGATGGCGATCCTCTTCATCACCCATG ATCTGCATGTGGTGCGCCGCATCGCCGACCGGGTGGTGGTGATGCGGCGCGGCGAAAAGGTCGAGGAAGGCCCGGTCGAA ACGGTCTTTGCCGATCCGCAAAACGCCTATACCCGCGCGCTGATCGACGCCGAGCCCGAGGGGCGCAAGCCGCCCGTCGC GGCGGATGCCCCGGTGGTGCTGGAGGTGCGCGAGGCCGCCGTGACCTTTGGTCGGCGGCGGCGGCTGTTTCAGCCCGCAG AGCCCGGCTTTCGCGCGGTCAACGGCGTGTCGCTGACCCTGCGGCGCGGCGAAACCATCGGGATCGTGGGGGAATCCGGC TCGGGCAAAAGCACGCTTGCCCGCGCGATCTTGCGGCTTTTGCCCGCGACCGGGTCGATCCGGCTGCATGGCCGCGCGAT CGAGGATCTCTCGCCGCGCGCCCTTCTGCCGCTGCGCCGCGACATGCAGGTGGTGATGCAGGATCCCTTCGGCAGCCTCT CGCCGCGGATGACCGCGGGGCAGATCGTGGCCGAGGGGCTTTTGGTGCATCACCCCGCGATGAGCGCTTCCGAGCGCGAC CGGGCCGCCGCCGAGGCGCTGGCCGAATGTCAGTTCGATCCGGCGCTTCGCAACCGCTATCCGCATGAATTTTCCGGCGG CCAGCGCCAGCGCATCGCCATCGCCCGGGCGCTGGTGCTCAAGCCCAGCATCATCGTGCTGGATGAGCCCACCTCGGCGC TGGATCGTCAGGTGCAAAAGCAGATCGTCGATCTGCTGCGGCGGCTGCAGGCGGAACACGGGCTGAGCTATCTGTTCATC AGCCACGATCTGGCGGTGGTGCGCGCGCTTTCGGACCGGATCATGGTGCTGAAATCGGGGGATCTGGTCGAAGAGGGCCC CTGCGCCGAGGTGATCGGCACGCCGAAACAGGACTACACCCGCCGTCTGGTGCAGGCCGCGCTGCTGAGCTGA Protein sequence : MTTPILELRDIHVRFATLDGAVEAVRGVSFAIRRGETVAVVGESGSGKSQIMMGVMGLLAQNGQISGTAEFHGMNLIGLP RRALNRIRGERIAMIFQEPMTSLDPLFPIGAQLIEPLCRHQGLSRKAAHARAIELLHLVQIPEPERRMRSYPHELSGGQR QRVMIAMAISNNPELLIADEPTTALDVTIQAEILTLLRDLQERLGMAILFITHDLHVVRRIADRVVVMRRGEKVEEGPVE TVFADPQNAYTRALIDAEPEGRKPPVAADAPVVLEVREAAVTFGRRRRLFQPAEPGFRAVNGVSLTLRRGETIGIVGESG SGKSTLARAILRLLPATGSIRLHGRAIEDLSPRALLPLRRDMQVVMQDPFGSLSPRMTAGQIVAEGLLVHHPAMSASERD RAAAEALAECQFDPALRNRYPHEFSGGQRQRIAIARALVLKPSIIVLDEPTSALDRQVQKQIVDLLRRLQAEHGLSYLFI SHDLAVVRALSDRIMVLKSGDLVEEGPCAEVIGTPKQDYTRRLVQAALLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-76 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-76 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-98 | 42 |
