Gene Information

Name : emrE (RCAP_rcc01891)
Accession : YP_003578043.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Resistance
Product : multidrug transporter EmrE
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 2041908 - 2042240 bp
Length : 333 bp
Strand : +
Note : -

DNA sequence :
ATGAAACCCTATCTTTACCTTCTCATCGCGGTGCTGTTCGAGACCTTCGGCTCCACCTGCCTGCAGGCCTCGAACCAGTT
CACCCGGCTCTGGCCGACGCTGGGCGTGATCTTCGGCTTCGGCGTCGCCTTCTGGTTCTTTACCCTGGTGCTGAAATCGC
TGCCGCTTGGCATCACCTATGCGCTCTGGTCGGGGATCGGCATCGTGCTGATCACCGCCTCGGGCTGGCTGATCTTTCAG
CAAAAACTCGACGCGCCCGCGCTTTTCGGCATCGGGCTCATCATCGCGGGCATCGCCGTCATCAACCTGTTTTCATCCGC
AGGCCATCCCTGA

Protein sequence :
MKPYLYLLIAVLFETFGSTCLQASNQFTRLWPTLGVIFGFGVAFWFFTLVLKSLPLGITYALWSGIGIVLITASGWLIFQ
QKLDAPALFGIGLIIAGIAVINLFSSAGHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 3e-16 52
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-16 52
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 3e-16 52
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 3e-16 52
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 3e-16 52
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 4e-16 52
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 3e-16 52
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-16 52
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-16 52
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-16 52
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-16 52
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-16 52
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 4e-16 52
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 3e-16 52
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-16 52
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 4e-16 52
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 3e-16 52
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 3e-16 52
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 3e-16 52
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-16 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_003578043.1 multidrug transporter EmrE BAC0377 Protein 2e-19 53
emrE YP_003578043.1 multidrug transporter EmrE BAC0322 Protein 2e-17 52
emrE YP_003578043.1 multidrug transporter EmrE BAC0323 Protein 1e-16 52
emrE YP_003578043.1 multidrug transporter EmrE BAC0150 Protein 3e-15 48
emrE YP_003578043.1 multidrug transporter EmrE NC_002695.1.913273.p Protein 3e-15 48
emrE YP_003578043.1 multidrug transporter EmrE BAC0324 Protein 6e-15 46
emrE YP_003578043.1 multidrug transporter EmrE BAC0002 Protein 5e-15 46
emrE YP_003578043.1 multidrug transporter EmrE NC_010410.6003348.p0 Protein 5e-15 46
emrE YP_003578043.1 multidrug transporter EmrE BAC0140 Protein 4e-12 46
emrE YP_003578043.1 multidrug transporter EmrE CP004022.1.gene1549. Protein 6e-16 45
emrE YP_003578043.1 multidrug transporter EmrE BAC0325 Protein 3e-15 45
emrE YP_003578043.1 multidrug transporter EmrE CP001138.1.gene1489. Protein 5e-15 45
emrE YP_003578043.1 multidrug transporter EmrE BAC0327 Protein 3e-16 44
emrE YP_003578043.1 multidrug transporter EmrE BAC0326 Protein 1e-13 44
emrE YP_003578043.1 multidrug transporter EmrE BAC0329 Protein 5e-14 44
emrE YP_003578043.1 multidrug transporter EmrE BAC0321 Protein 3e-14 43