|
Name : tkt1 (RCAP_rcc01832) Accession : YP_003577984.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1977911 - 1979884 bp Length : 1974 bp Strand : - Note : - DNA sequence : ATGAAGGATCTCGATATGGCGCAGGAAACGCGGATGGCCAATGCCATCCGGGCGCTGGCGATGGATGCGGTGGAACAGGC GAAATCCGGGCATCCCGGCATGCCGATGGGCATGGCCGATGTCGCCACCGTTCTTTTCAACCGTTTCATGAAGATCGACC CGGCGGCGCCGAAATGGCCCGACCGTGACCGCTTCGTGCTGTCCGCGGGTCATGGCTCGATGCTGCTTTATGCGCTGCAC CATCTGCTCGGCTATGCCGACATGGATATCGCGCAGCTGAAAAACTTCCGCCAGCTTGGCGCCCGCACCGCCGGCCATCC CGAATATGGCCATGCCGACGGCATCGAGATGACGACCGGCCCGCTCGGTCAGGGGATTGCGACCGCGGTCGGCATGGCGC TGGCCGAGCGCATGAAGAACGCACGTTATGGCGATGATCTGGTTGATCATTTCACCTATGTCATCGCCGGGGACGGCTGC CTGATGGAGGGCATCAGCCACGAGGCGATCGACCTGGCCGGGCATCTGGGGCTGGGCCGTCTGATCGTGTTTTGGGATGA CAACCGCATCACCATCGACGGCGACACCGATCTTTCGACCTCGACCGATCAGAAGGCGCGCTTTGCCGCCTCGGGCTGGC ATGTGCAATCCTGCGACGGTCATGCGCCCCATGAGATCGCCGCCGCGATCGAGGCCGCCAAGGCCGACCCGCGCCCCTCG ATGATCGCCTGCCGCACGGTGATCGGCTTTGGCGCGCCGAACAAGCAGGGCGGCCACGATGTGCACGGCGCGCCCTTGGG CGCCGAGGAAATCGCCGCCGCGCGGGCTTTCCTTGACTGGCCGCATGCCCCTTTCGAGATCCCTTCCGAACTCACCGCGG CCTGGGGCCGGGTTGCGGCACGGGGGGCTTCGGCGCGGGCCAACTGGGAGGCGCGGTTGCAAAACCACGCGGCCCGCGCC GACTTCATCAAGGCCGAGGCCGACGACACCTCGGCCCTGCCCGCCGCCATCGCGGCCTATAAGGCGCGTCTTTCCGCCGA CAAGCCGAAAGTGGCGACGCGCAAGGCCAGCGAGATGGCGCTCGAGGTGGTGAATGCCACCCTGCCCCACTCCGTTGGCG GCTCGGCCGATCTGACCGGCTCGAACCTGACCCGGTCGAAGGGGATGGTCTCGGTGAAGCCGGGCGCCTTTGCGGGCAAC TATATTCACTACGGCATCCGCGAACACGGGATGGCGGCGGCGATGAACGGCATAGCGCTGCATGGCGGCCTGCGCCCCTA TGGCGGCACCTTCATGGCCTTTGCCGATTACTGCCGCCCGTCCATTCGCCTCTCGGCGCTGATGGGGGTTCCGGTCACCT ATGTGATGACGCATGACTCGATTGGTCTGGGCGAGGACGGGCCGACCCACCAGCCGGTCGAGCATCTGGCCTCGCTGCGG GCGATCCCGAACCTGAACGTGATCCGCCCCGCCGATGCGGTCGAGACCGCCGAGGCCTGGGAAATCGCCATGACCTCCAA GGCGACGCCGAACCTGCTGGTGCTGTCGCGGCAGAACCTGCCGACGCTGCGCACCACCCATACGGCCGAGAACCTGACCG CGCGCGGCGCCTATCTCTTGCGCGGTCCCGAGGACCGGCAGGTGACGCTGATCGCCACCGGCTCCGAGGTCGAGATTGCG CTCGCCGCCGCCGATCAGCTGGCGAAAGAGGGGATCCGCGCCGCCGTCGTCTCTGCCCCCTGCTTTGAACTTTTCGCGGC GCAACCGCGCGATTATGTGACGAAGGTTCTGGGCACGGCGCCGCGGGTGGGCTGCGAGGCGGCGATCCGGCAAGGCTGGT GCATGCTGCTTGGGCCCACCGATGCCTTTGTCGGCATGACCGGCTTTGGTGCCTCGGCCCCTGCCCCGCAGCTTTATCAA CACTTCAACATCACCGCAGAGGCGCTTGTCTCTGAAGCAAAAAACCTGATCTGA Protein sequence : MKDLDMAQETRMANAIRALAMDAVEQAKSGHPGMPMGMADVATVLFNRFMKIDPAAPKWPDRDRFVLSAGHGSMLLYALH HLLGYADMDIAQLKNFRQLGARTAGHPEYGHADGIEMTTGPLGQGIATAVGMALAERMKNARYGDDLVDHFTYVIAGDGC LMEGISHEAIDLAGHLGLGRLIVFWDDNRITIDGDTDLSTSTDQKARFAASGWHVQSCDGHAPHEIAAAIEAAKADPRPS MIACRTVIGFGAPNKQGGHDVHGAPLGAEEIAAARAFLDWPHAPFEIPSELTAAWGRVAARGASARANWEARLQNHAARA DFIKAEADDTSALPAAIAAYKARLSADKPKVATRKASEMALEVVNATLPHSVGGSADLTGSNLTRSKGMVSVKPGAFAGN YIHYGIREHGMAAAMNGIALHGGLRPYGGTFMAFADYCRPSIRLSALMGVPVTYVMTHDSIGLGEDGPTHQPVEHLASLR AIPNLNVIRPADAVETAEAWEIAMTSKATPNLLVLSRQNLPTLRTTHTAENLTARGAYLLRGPEDRQVTLIATGSEVEIA LAAADQLAKEGIRAAVVSAPCFELFAAQPRDYVTKVLGTAPRVGCEAAIRQGWCMLLGPTDAFVGMTGFGASAPAPQLYQ HFNITAEALVSEAKNLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-134 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-125 | 47 |
