Gene Information

Name : kpsT1 (RCAP_rcc00170)
Accession : YP_003576342.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein KpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 202248 - 202931 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGAGCTGCGGAACCTGAACAAGACCTTCCGGCTGAACGGGGTGTCGAAGACAGTGGCGCGCGACATCAACTTCGT
CTTTCCGACGGGCGAGGCGGTGGCGCTTTTGGGCGGCAACGGCGCGGGCAAATCCACCATGCTCAGCATGATCGCGGGCA
CGGTCGAGCCGGACAGCGGCGAAGTGCTTTCGGACGGGTCGGTGTCCTGGCCGATCGGCTTTGCGGGCAGCTTTCACGGC
GATCTGACCGGGGCGCAGAACGTGCGCTTCATCGCCCGCGTCTATGGCATCGACACCGACGAGGCGATCCGGTTCTGCCG
CGACTTCGCCGATCTGGGGCAGCATTTCCACCTGCCGACGCGGACCTATTCCTCGGGGATGCGGTCCCGGCTGGCCTTTG
CCATGTCGATGGCCGTGCCCTTCGACACCTATCTGATCGACGAGGTGATGTCGGTCGGCGACAGCTCGTTCAAGGCGAAG
TGCCAATCCTTCATGCAGGAACGGCTGAAGACCTCAAGCGCGATCATCGTCTCGCACCAGTTCGGGGAACTCAAGCGGCT
TTGCGCCTCGGGGGTCTATCTGGAGGGCGGGCAGCTTTATTACTACCCCGAGGTCGGCCAGGCGATCGAGCATTACCAGA
AGGCGATGCAGCGCAATGCCGCCCGCACGCCCGGCGGCGTCTGA

Protein sequence : 
MIELRNLNKTFRLNGVSKTVARDINFVFPTGEAVALLGGNGAGKSTMLSMIAGTVEPDSGEVLSDGSVSWPIGFAGSFHG
DLTGAQNVRFIARVYGIDTDEAIRFCRDFADLGQHFHLPTRTYSSGMRSRLAFAMSMAVPFDTYLIDEVMSVGDSSFKAK
CQSFMQERLKTSSAIIVSHQFGELKRLCASGVYLEGGQLYYYPEVGQAIEHYQKAMQRNAARTPGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 5e-47 46
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-43 44
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT1 YP_003576342.1 capsule polysaccharide export ATP-binding protein KpsT VFG1449 Protein 2e-47 46
kpsT1 YP_003576342.1 capsule polysaccharide export ATP-binding protein KpsT VFG0696 Protein 6e-45 44
kpsT1 YP_003576342.1 capsule polysaccharide export ATP-binding protein KpsT VFG0258 Protein 4e-44 44
kpsT1 YP_003576342.1 capsule polysaccharide export ATP-binding protein KpsT VFG2563 Protein 7e-46 43