Gene Information

Name : aldB (RCAP_rcc01620)
Accession : YP_003577772.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.4
Position : 1752029 - 1753555 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence :
ATGGCCAACGACATGCCGCATGATTTCAAGGGGGTGATGGTGTCGCCCTTCAAGCCGCGCTACGACAATTTCATCGGCGG
CAAATGGACCCCGCCGGTCGGGGGCAAGTATTTCGACAACATCACGCCGATCACCGGCGAGAAGATCTGCGAAGTTGCCG
CCTCGACCGCGGCGGATGTCGAGCTGGCGCTCGATGCCGCCCATGCCGCGAAAGGCGACTGGGGCACCACCTCGGCCGCG
CATCGCTCGAACGTGCTTTTGAAGATCGCCGACCGGCTGGAGCAGAACCTTGACCTGCTCGCCGCCGCCGAGACCTGGGA
CAACGGCAAGCCGATCCGCGAAACCACCGCCGCCGATATCCCCCTTTCCGTCGACCATTTCCGCTATTTCGCGGGGGTGC
TGCGCGGGCAGGAAGGCTCGATGTCGGAAATCGACAATGACACCGTCGCCTATCACTATCACGAGCCGCTGGGCGTCGTC
GGGCAGATCATCCCGTGGAACTTCTCGATCCTGATGGCGGCGTGGAAACTGGCCCCGGCGCTGGCGGCGGGCAACTGCAT
CGTGCTGAAACCGGCCGAACAGACCCCCTCCGCGATCATGGTGCTGATCGACGTGATCAAGGACCTGCTGCCGCCGGGTG
TGCTGAACATCGTCAACGGCATGGGCCCCGATGTCGGCGCGCCGCTCGCGCGCTCGAACCGGATCGCGAAGATCGCCTTC
ACCGGCTCGACCGAGACCGGCCGCAAGATCATGCAATATGCGACCGAGAACCTGATCCCGGTGACGCTGGAGCTGGGCGG
CAAGTCGCCGAACATCTTCTTTTCGGATGTGATGGCGAAAGATGACGCCTTCCTCGACAAGGCGGTCGAGGGTTTCGTTC
TGTTCGCCTTCAACCAGGGCGAGGTCTGCACCTGCCCGTCGCGCGCGCTCATTCAGGAGGACATCTACGAAGAGTTCATC
GCCCGCGCCATTGCCCGGGTGAAGGCGATCAAGCAGGGCGACCCGCGCCTGATGGAGACGATGGTCGGCGCGCAGGCCAG
CCAGGAACAGCAGGACAAGATCCTGTCCTATCTCAAGATCGGCCGCGAGGAAGGCGCGCAGGTCCTGTGCGGCGGCGATG
CGGCAAGCCTTGGCGGCGATCTGGCGAACGGCTTCTACATCCAGCCGACGATCCTCAAGGGTCACAACAAGATGCGGGTC
TTCCAGGAGGAAATCTTCGGGCCGGTCGTGTCGGTGACCACCTTCAAGGACGAGGACGAAGCCCTGCATATCGCCAATGA
CACGATGTACGGCCTGGGCGCCGGCGTCTGGTCGCGCGACATCAACACCTGCTACCGCTTTGGCCGCCACATCCAGGCCG
GGCGCGTCTGGGTGAACAACTACCACGCCTATCCGGCCCATGCGGCCTTTGGCGGCTACAAGCAATCGGGCATCGGGCGT
GAAACCCACAAGATGATGCTCGATCACTACCAGCAGACCAAGAACATGCTGGTCAGCTACAACCCGAACAAGCTGGGCTT
CTTCTGA

Protein sequence :
MANDMPHDFKGVMVSPFKPRYDNFIGGKWTPPVGGKYFDNITPITGEKICEVAASTAADVELALDAAHAAKGDWGTTSAA
HRSNVLLKIADRLEQNLDLLAAAETWDNGKPIRETTAADIPLSVDHFRYFAGVLRGQEGSMSEIDNDTVAYHYHEPLGVV
GQIIPWNFSILMAAWKLAPALAAGNCIVLKPAEQTPSAIMVLIDVIKDLLPPGVLNIVNGMGPDVGAPLARSNRIAKIAF
TGSTETGRKIMQYATENLIPVTLELGGKSPNIFFSDVMAKDDAFLDKAVEGFVLFAFNQGEVCTCPSRALIQEDIYEEFI
ARAIARVKAIKQGDPRLMETMVGAQASQEQQDKILSYLKIGREEGAQVLCGGDAASLGGDLANGFYIQPTILKGHNKMRV
FQEEIFGPVVSVTTFKDEDEALHIANDTMYGLGAGVWSRDINTCYRFGRHIQAGRVWVNNYHAYPAHAAFGGYKQSGIGR
ETHKMMLDHYQQTKNMLVSYNPNKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-134 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-139 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_003577772.1 aldehyde dehydrogenase VFG0082 Protein 2e-134 63