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Name : RCAP_rcc01439 (RCAP_rcc01439) Accession : YP_003577591.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : 3.6.3.- Position : 1551983 - 1553797 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGGCGGTTTCGGAACAGGCGGGCACAGAGGCACCGGGGGCGGGGCGCAGGCCGCCGTCGCCCTGGCGCATCCTGAACCC CGTGCGGGGGCAGATCCGGCTGGCGATGGCGATTTCGGCGGGCTCGGCGCTTTCAGCGCTTGGGGTGATGGTGTCGCTGA CGCTGGTGATCCGCGCGCTGCTGGACCGGCCGGAGATCATGCCCTGGGGCCCGCTTGGCGCGGCGGCGCTTTGCACGGTT GCCGCCTATGCCGCCCGGCTTGGCGCCTTCAACCAGGCGCATTACGCGGCCTTCCGGCTGGAGCGGATCTTGCGCATCGG TCTGGCGAACCGGCTGGCGCGGGTGTCGCTGGGCTATGTCGAGGCGCAGGGCGCGGGCGCGCTGGCCAAGGTCATCCATG ACGACGTGAAGGCGCTGCATGTCTTTGTCGCCGACAGCACGCCGCTTTATGCCCGCGCCTATGTCACGCCGGTCGTGACC TTCGCGCTGCTTTGGCTGTTCGACTGGCGGCTGGCGCTGGTGGCGCTGGCGGTGCTGGCGCTTGGCTGGGGCATCCTGCG CGGGGCGCAGCGGCGGCGGCGCGACATGGTGCGGGCCTATAATGCGGCGCGCGAAAAGGTCAGCGCGGCGGTTGTGGAAT ATGTGCAGGCGATGCCCGTGGTGCGCAATTTCGACAGCGGCCAAAGCAGTTTCGGCCGCTATCAGGCGGCGCTCGACGGC TATCTGGCGGTGATGCTGGACTGGTACCGCGCCGCGGGTTTTCCGGCGCGGTTCTCCTGGCTGATGCTGGGCCCGATGCC GACGCTGACGCTGGTCCTTGGCGCGGGGCTTTGGTTCAGCGCGATGGGCGATCTGTCGGTGCCGCGCTGGCTGGGGGTGC TTCTGGCCTGCACCGGCATGGCCGAGGCGATGATGCCGATGATGATGCTGCGCCACATGATCGAAAAGGTCGGGCTGAGC GTGGCGCGGATCGAGGAGGTGATGGCCGCCCCCGATCTGGACGAGGCCGGGGCGATGCCGCCCGGGCCGCTCGCCTTCGA CCCTGCGGCGCCTGCGCTGCGCTTTGACCGGGTGCGGTTTTCCTATGCGCCCGACCTGCCCCCGGCGCTTGACGATGTCA GTTTCGAGGTCGCGCGCGGCAGTGTCACCGCGCTGGTCGGCCCCTCGGGCGCGGGCAAGACCACGGTGGCGCGTCTGGTG CCGCGGTTCTGGGATGTCACCGCGGGCAAGATCGAGATCGGCGGCCATGACATCCGCAAGATCGGCGCCGGGCGGCTGAT GCAACAGGTCGCCTTCGTGTTTCAGGAAAGCTTCCTTTTTGCCGATACCATCGCGGCGAATATCCGCATCGGCCGCCCCG AGGCCACCGAGGCCGAGGTGATCGCGGCGGCACGGGCGGCGCAGGCTCATGACTTCATCACCGCGCTGCCGCAGGGCTAC GAGACCCGGGCGGGGGAACGCGGCGTGTTCCTCTCGGGCGGGCAGCGCCAGCGCATCGCCATTGCCCGGGCGCTGCTGCA AGATCGTCCGGTGCTGGTGCTGGACGAGGCGACGGCCTTTGCCGATCCGGAAAACGAGGCCGAGCTGATTGCGGCGCTCT CCGAGCTGATGCGCGGGCGCACGGTGATCATGGTGGCGCATCGGCTGGCGACGATCCGCGATGCCGATCAGATCCTTGTC TTCGAGCGCGGCCGGATCGTCGAGCGCGGCCGTCACGCGGCGCTGGTGGGGCAGGGCGGGCTTTATGCAAGGCTTTGGCA GAATTACGAAACGGCGCAAAACTGGTCGCTTGGCGCGGCCCGGGAGGGGATCTGA Protein sequence : MAVSEQAGTEAPGAGRRPPSPWRILNPVRGQIRLAMAISAGSALSALGVMVSLTLVIRALLDRPEIMPWGPLGAAALCTV AAYAARLGAFNQAHYAAFRLERILRIGLANRLARVSLGYVEAQGAGALAKVIHDDVKALHVFVADSTPLYARAYVTPVVT FALLWLFDWRLALVALAVLALGWGILRGAQRRRRDMVRAYNAAREKVSAAVVEYVQAMPVVRNFDSGQSSFGRYQAALDG YLAVMLDWYRAAGFPARFSWLMLGPMPTLTLVLGAGLWFSAMGDLSVPRWLGVLLACTGMAEAMMPMMMLRHMIEKVGLS VARIEEVMAAPDLDEAGAMPPGPLAFDPAAPALRFDRVRFSYAPDLPPALDDVSFEVARGSVTALVGPSGAGKTTVARLV PRFWDVTAGKIEIGGHDIRKIGAGRLMQQVAFVFQESFLFADTIAANIRIGRPEATEAEVIAAARAAQAHDFITALPQGY ETRAGERGVFLSGGQRQRIAIARALLQDRPVLVLDEATAFADPENEAELIAALSELMRGRTVIMVAHRLATIRDADQILV FERGRIVERGRHAALVGQGGLYARLWQNYETAQNWSLGAAREGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp6 | YP_001006813.1 | lipoprotein inner membrane ABC-transporter | Not tested | HPI | Protein | 2e-117 | 54 |
| ybtP | YP_070126.1 | lipoprotein inner membrane ABC-transporter | Virulence | HPI | Protein | 2e-117 | 54 |
| irp6 | YP_002346904.1 | lipoprotein inner membrane ABC transporter | Not tested | HPI | Protein | 1e-117 | 54 |
| ybtP | CAA21388.1 | - | Virulence | HPI | Protein | 1e-117 | 54 |
| ybtP | YP_853073.1 | inner membrane ABC-transporter | Not tested | PAI IV APEC-O1 | Protein | 1e-117 | 54 |
| ybtP | NP_669704.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-117 | 54 |
| ybtP | NP_993009.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-117 | 54 |
| irp6 | CAB46573.1 | lipoprotein inner membrane ABC-transporter, Irp6 | Virulence | HPI | Protein | 5e-116 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RCAP_rcc01439 | YP_003577591.1 | ABC transporter ATP-binding/permease | BAC0432 | Protein | 7e-118 | 54 |
