Gene Information

Name : fepC1 (RCAP_rcc01437)
Accession : YP_003577589.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein FepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1549971 - 1550786 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence : 
GTGACACCCCCAACCCTGTCGGCGCGCGGTCTTGTGGCGGGCTATGGCGCGGCGCCGGTGCTGCAGGGCATCGACCTTGA
CATCGCGCCGGGCAAGATCACCGTCATCGTCGGCGCCAATGCCTGCGGCAAGTCCACGCTGCTGCGCGCGCTGGCGCGGC
TCTTGCCGCTGCGGGCGGGGCGGGTGACCTTTGACGGCACCGATCTGCACCGGATCGCGCCGCGCAGGCTGGCGCGCAGG
CTTGGCTTCTTGCCGCAAACGCCGATCGCCCCCGAGGGCATCACCGTGCTGGATCTGGTCAGCCGCGGGCGCCATCCGCA
TCAGGGGCTGTTTGCGCGCTGGAGCCCCGCCGATGCCGCAGCCGTCGCCCGGGCGCTCGATGTCACCGACACCGCGGCGC
TGGCCGGGCGCGATCTGGCGGCGCTGTCGGGCGGGCAGCGCCAGCGCGTCTGGATCGCCATGGCGCTGGCGCAGGAGACC
GAGCTGCTGCTTTTGGACGAGCCGACGACTTTTCTGGACATCAACCATCAGATCGAAGTGCTGGATCTTCTGGCCGATCT
CAACCGCCGCCGCGGCACCTCGGTGGTGATGGTGCTGCATGATCTCAATCTGGCGGCGCGCTATGCCGATGTGCTGGTGG
CGATGCGGGCCGGGCGGCTGCACGATCAGGGCCCGCCCGGGGCGGTGCTGAGCGCGGCCAATATCCGCGCGCTTTTCGGA
CTGGACAGCACGATCCTGCCCGATCCGGTCAGCGGGCGGCCGATGATGATCCCGCACGGGCGGCAGACGGGACAAAGGGG
GCTTGCGCATGGCTGA

Protein sequence : 
MTPPTLSARGLVAGYGAAPVLQGIDLDIAPGKITVIVGANACGKSTLLRALARLLPLRAGRVTFDGTDLHRIAPRRLARR
LGFLPQTPIAPEGITVLDLVSRGRHPHQGLFARWSPADAAAVARALDVTDTAALAGRDLAALSGGQRQRVWIAMALAQET
ELLLLDEPTTFLDINHQIEVLDLLADLNRRRGTSVVMVLHDLNLAARYADVLVAMRAGRLHDQGPPGAVLSAANIRALFG
LDSTILPDPVSGRPMMIPHGRQTGQRGLAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-46 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-40 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-38 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-44 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-44 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-31 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-31 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-40 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-40 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-40 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-40 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-31 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC1 YP_003577589.1 ferric enterobactin transport ATP-binding protein FepC BAC0164 Protein 2e-40 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC1 YP_003577589.1 ferric enterobactin transport ATP-binding protein FepC VFG1042 Protein 2e-40 49
fepC1 YP_003577589.1 ferric enterobactin transport ATP-binding protein FepC VFG0925 Protein 7e-46 49