Gene Information

Name : xylA (RCAP_rcc00014)
Accession : YP_003576186.1
Strain : Rhodobacter capsulatus SB 1003
Genome accession: NC_014034
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 16372 - 17673 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
ATGACCGACTTCTTCAAGGGTATTCCGCAAATCCGCTATGAAGGCCCGAATTCGACCAATGAATTCGCCTTCCGGCACTA
CAACCCCACGGAAGTGGTGATGGGCAAGACCATGGCCGAGCATCTGCGCTTTGCCATCGCCTGGTGGCACAGCTTCGCCT
GGCCGGGCGGCGACCCGTTCGGCGGTCAGACGTTTGATCGGCCGTGGTTTGGCGACACGCTTGATCTGGCGAAGCTGAAA
GCCGATGTCGCCTTCGAGATGTTCGACATTCTCGGCGCGCCGTTCTTCTGCTTCCACGATGCCGACATCCGCCCCGAGGG
CAGGGATTTCGCGGAAAACACCCGCAATCTGGAAGTGATCGTCGATTACATCGGCGAGAAGATGGCGGACTCGAACACCA
AGCTTCTGTGGGGCACGGCGAATCTCTTCAGCCACCGCCGCTTCATGTCGGGCGCGGCGACGAACCCCGATCCGGAGGTC
TTTGCCTGGTCTGCCGCGACGGTGAAGACCTGCATGGATGCCACGCACAAGCTTGGCGGCGCCAACTATGTGCTTTGGGG
CGGCCGCGAGGGCTATGAAACGCTTCTGAACACCGATCTGACCCGCGAGGCGGAACAGGCCGGGCGCTTCCTGCAGATGG
TCGTCGACTACAAGCACAAGATCGGCTTCAAGGGCACGATCCTGATCGAGCCGAAACCGCAGGAGCCGTCGAAGCACCAA
TATGACTACGATGTGGCGACGGTTTACGGCTTCCTGAAACGCTTCGGGCTGGAAAACGAGGTCAAGGTGAACATCGAACA
GGGTCACGCGATCCTGGCCGGGCACAGTTTCGAGCATGAACTGGCGCTGGCGGCTTCGCTTGGCATCCTTGGTTCGATTG
ACATGAACCGCAACGATTACCAATCGGGCTGGGACACCGACCAGTTCCCGGATTCGGTTCCCGAGATGGCGCGGGCCTAT
TACGAAGTGCTGAAAGCGGGCGGCTTCACCACCGGCGGCACCAATTTCGACGCGAAGATCCGCCGTCAGTCGATCGACCC
GGAGGATCTGATCCTCGGCCATGTCGGCGCGATGGATGTCTGCGCCCGGGCGCTGAAGGCGGCGGCGGCGCTTTTGGAAG
ATGGCGGGCTCGAAGCCAATCGCAAGGCGCGTTATGCGGGTTGGGACACGGCCGAGGCAAAGGCGATGCTCGGCTCGGAT
CTGGCCTCGATCGAGGCGCTGGTGCGGGCGAAAGGCATCAACCCGCAGCCGAAATCCGGGCGGCAGGAGCGGCTGGAAAA
TCTGTGGAACCGGTTCGTCTGA

Protein sequence :
MTDFFKGIPQIRYEGPNSTNEFAFRHYNPTEVVMGKTMAEHLRFAIAWWHSFAWPGGDPFGGQTFDRPWFGDTLDLAKLK
ADVAFEMFDILGAPFFCFHDADIRPEGRDFAENTRNLEVIVDYIGEKMADSNTKLLWGTANLFSHRRFMSGAATNPDPEV
FAWSAATVKTCMDATHKLGGANYVLWGGREGYETLLNTDLTREAEQAGRFLQMVVDYKHKIGFKGTILIEPKPQEPSKHQ
YDYDVATVYGFLKRFGLENEVKVNIEQGHAILAGHSFEHELALAASLGILGSIDMNRNDYQSGWDTDQFPDSVPEMARAY
YEVLKAGGFTTGGTNFDAKIRRQSIDPEDLILGHVGAMDVCARALKAAAALLEDGGLEANRKARYAGWDTAEAKAMLGSD
LASIEALVRAKGINPQPKSGRQERLENLWNRFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-87 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-87 52