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Name : kdsD (RCAP_rcc00114) Accession : YP_003576286.1 Strain : Rhodobacter capsulatus SB 1003 Genome accession: NC_014034 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 120773 - 121729 bp Length : 957 bp Strand : + Note : - DNA sequence : ATGACATCTTCCACCACTGATTTCGCCAAGACCGCGCGGCGGGTGATCGAAATCGAGATCGCCGGGCTGACGGCGCTGGC CGAAAGTCTGGACGGCGCCTTTGGCGCGGCGGTGCAGATGATCCTTTCTGCGCGCGGGCGGGTGATCGTTTCGGGCATGG GCAAGTCGGGCCATATCGCGCGCAAGATCGCGGCGACCTTGGCCAGCACCGGCACGCCCGCGCAATTCGTGCATCCGGCC GAGGCGAGCCATGGCGATCTGGGCATGGTCACGCGCGAGGATGTGGCGCTGGTGCTGTCGAATTCGGGCGAGACGCCGGA GCTGGCCGATCTGATCGCCCATACGCGGCGGTTTTCCATTCCGCTGATCGGCGTCGCCGCGCGGCCCGATTCGACGCTGT TGCGGCAGGCCGATGTGGCGCTGGTGCTGCCGCAGGCGGTCGAGGCTTGCGGCACCGGCGTCGTGCCCACCACCTCGACA ACGATGACGCTGGCCTTGGGCGATGCGCTGGCGGTCGCGCTGATGGAGCATCGCCAGTTCACCCCCGAACATTTCCGCAC TTTCCACCCCGGCGGCAAGCTGGGGGCGAAGCTGTCGAAAGTCGCGGATCTGATGCACCGGGACATGCCGCTGGTCACCG GCACGACGCCGATGCCCGAGGCGCTTCTGATCATCAGTCAAAAGGGCTTCGGCGTCGTCGGCGTCACCGATGCCGGGGGG CGGCTGATCGGCATCGTCACCGATGGCGATTTGCGCCGCCACATGGACGGGCTCTTGTCGCGCAGCGTGGCCGAGGTGAT GACCCGCACGCCGCGCACCATCGCCCCCACCGCGCTGGCCGAGGCCGCCGTGGCGGTGATGAACGACTGCAAGATCACCT GCCTCTTCGCGGTCGAGGACGGCAAGCCGGTCGGCATCCTGCATATCCACGACTGCCTGCGCGCCGGGGTGGTGTGA Protein sequence : MTSSTTDFAKTARRVIEIEIAGLTALAESLDGAFGAAVQMILSARGRVIVSGMGKSGHIARKIAATLASTGTPAQFVHPA EASHGDLGMVTREDVALVLSNSGETPELADLIAHTRRFSIPLIGVAARPDSTLLRQADVALVLPQAVEACGTGVVPTTST TMTLALGDALAVALMEHRQFTPEHFRTFHPGGKLGAKLSKVADLMHRDMPLVTGTTPMPEALLIISQKGFGVVGVTDAGG RLIGIVTDGDLRRHMDGLLSRSVAEVMTRTPRTIAPTALAEAAVAVMNDCKITCLFAVEDGKPVGILHIHDCLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-46 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-46 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-46 | 43 |
