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Name : serS (PRU_0700) Accession : YP_003574060.1 Strain : Prevotella ruminicola 23 Genome accession: NC_014033 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 826498 - 827817 bp Length : 1320 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGTTAACACTCAAACTCATCAATGAGGAAACAGAACGCGTAATTCGCGGATTGGAGAAGAAACACTTCGCCGGCGCCAA GGAGGCTATCGACAATGTACTGGCCGTTGACAAGCAGCGTCGCGAAGCTCAGCAGGAACTTGATAAATGCCTGAACGAGC AGAAGCAGCTCTCAGGACAGATAGGCCGTCTGATGAAGGAAGGCAAGAAGGACGAGGCCGAGCAGGTAAAGGCTCAGGTG GCTCAGCTCAAGGAGAAGTCAAAGGAGCTCGACGAGACTATGGCTAAGGCTCAGGAGGAGATGACCACTCTGCTGTGCCA GATTCCTAATATCCCTTACGACGAGGTTCCCGAGGGCAAGGTAGCTGAGGATAACCACGTAGTAAAGAGCAACCTGAAGG AGTGCACCGCTAACGACACCGTTGGAAACTGGGACGTTAACCCATCACTTGGTATCGCTAATCCCCTGCCCCACTGGGAG CTGGCCAAGAAATACAACCTCATCGACTTTGATCTGGGCGTAAAGATCACTGGTGCCGGATTCCCCGTTTATATCGGTAA GGGTGCCCGTCTGCAGCGTGCCCTCATCAACTTCTTCCTCGACGAGGCCCGTAAGAGCGGCTACACCGAGATTATGCCTC CTACAGTAGTTAATGCTGCATCAGGCTACGGTACAGGCCAGCTGCCCGATAAGGAGGGACAGATGTACCACTGCGAGGTT GACGACTTCTATCTCATCCCAACAGCCGAGGTACCTGTAACAAACATCTATCGCGACGTGATCCTCGACGAGAAGGATCT GCCTATCAAGAACTGTGCTTACACAGAGTGCTTCCGTCGTGAGGCTGGCTCATACGGTAAGGACGTTCGCGGACTGAACC GTTTGCACGAGTTCTCGAAGATTGAGATTGTACGTATCGATAAGCCCGAGCACTCAAAGGAGAGCCACAAGGAGATGCTG GAACACGTTGAGGGCCTGCTCAAGAAGTTAGAGCTTCCCTATCGTATTCTGCTGCTTTGCGGTGGCGATCAGAGCTTTAC AAGCGCTATCTGCTACGACTTCGAGGTTTACTCAGAGGCTCAGGGACGCTGGCTCGAGGTATCAAGTGTATCTAACTTCG ACACCTACCAGGCTAACCGCTTGAAGTGCCGCTATCGTAACAGCGAGACCAAGAAGACCGAGCTGTGCCACACACTGAAC GGATCGGCTTTGGCTCTGCCTCGTATCGTGGCTGCCCTGCTGGAGAACAATCAGACCGAAAACGGTATCAAGATCCCAGC AGCACTCGTACCCTACATGGGTTGCGACATGATTGATTAA Protein sequence : MLTLKLINEETERVIRGLEKKHFAGAKEAIDNVLAVDKQRREAQQELDKCLNEQKQLSGQIGRLMKEGKKDEAEQVKAQV AQLKEKSKELDETMAKAQEEMTTLLCQIPNIPYDEVPEGKVAEDNHVVKSNLKECTANDTVGNWDVNPSLGIANPLPHWE LAKKYNLIDFDLGVKITGAGFPVYIGKGARLQRALINFFLDEARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEV DDFYLIPTAEVPVTNIYRDVILDEKDLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKIEIVRIDKPEHSKESHKEML EHVEGLLKKLELPYRILLLCGGDQSFTSAICYDFEVYSEAQGRWLEVSSVSNFDTYQANRLKCRYRNSETKKTELCHTLN GSALALPRIVAALLENNQTENGIKIPAALVPYMGCDMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-66 | 41 |
