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Name : PRU_0600 (PRU_0600) Accession : YP_003573969.1 Strain : Prevotella ruminicola 23 Genome accession: NC_014033 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 701688 - 703883 bp Length : 2196 bp Strand : - Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371 DNA sequence : ATGCAAAAGAACGTTTTTTCCTGTCAAATTGCCACACAATTAGGCATCAGTCAGAAGTTCGTTGAAGCCACGTTAGCCTT GCTCGACGAGGGCTGCACCATACCCTTTATTGCCCGATACCGCAAAGAGCGTACAGGCGGACTGGATGAGGTACAGATAG CTGCTATCAGCGACCGTTACGAGAAGCTGCTCGATATACAGAAACGCAAGGAAACAGTTATCAAAACCATCACCGACCTT GATAAGATGACACCCGAACTCCAAGAGCGCATTAATCAGTGCTGGGATGCCACCGAAATCGAGGATATCTACCTACCCTA CAAGCCTAAACGTCGCACCCGCGCACAAGTGGCCCGTGAACAAGGGCTGGAGCCACTGGCTCTGCTGCTGATGAAACAAC GCGAGCGTGATCCAGAAGCAGCTGCAGCCAAGTTTGCAAAGGGCGATGTGGACAGCGTAGAAAGCGCCATCAAAGGGGCT CAGGACATTATTGCCGAGGTGGTAAGCGAAAACGAGAAATCACGCCAACAGCTACGTAATGCCTTTACCCGCCAAGCTGT TATCACCTCTAAAGTGGTAAAAGCCAAGGCCAATAGCGACGAAGCAGCCAAATATAGCGACTATTTTGACTGGAGCGAAC CACTAAAACGTTGTTCGTCCCACCGTCTGCTGGCCATGCGCCGAGGCGAATCAGAGGGTATCTTACGCATCAGTATTTCG CCCAACGATGATGAAGCCCTTGAGCGCCTGAAGCACCACTATGTTTATGGTAACACCCCATGCGGCCGCTTGGTAGCCGA GGCTATCGACGATGGTTACAAACGTTTGTTGAAACCAGCTATCGAAACCGAGTTTGCCGCACAAAGTAAAGAAAAGGCCG ATGAAGAAGCTATCCACGTATTTGCCGAAAATCTACGCCAACTGTTGTTAGGCGCCCCGTTAGGTCAGAAGCGCGTATTG GGTATCGACCCAGGTTTTCGTACTGGTTGCAAAGTAGTATGCTTAGATGCCCAAGGCAACCTGCTGCACCACGATGTGAT TATGCCCCACCCACCTGTAAACAAACGTACTGAGGCCGCTATCACCCTGCAGCGCCTGATTCAGAAATTTCAGATAGAAG CCATCTCTATTGGTAATGGTACCGCCAGTCGCGAAACAGATAGTTTTGTAAAAGATGTACTCGCTGGTAAATACAATGTT GCAGCAGATTCAAAATCTTCCAAAGCGAAAGCTGATGACAAAAATGCTCCCACCCCACAGGTCTTTGTTGTTTCCGAAGC TGGTGCCTCAGTTTATTCTGCCTCGAAAGTGGCTCGCGATGAATTCCCCAATGAGGATGTAACCGTTCGTGGTGCCGTTT CTATTGGTCGACGACTGATGGATCCACTGGCCGAACTGGTAAAAATCGATCCTAAGAGCATTGGTGTAGGACAGTATCAG CACGACGTGGACCAAACCAAACTCAAGCACTCTCTCGACCAAACAGTAGAGAGTTGTGTAAACCTGGTAGGAGTAGATTT GAACACCGCCTCGCAGCACCTGTTGATGTACGTGAGTGGCCTTGGTGCCACACTGGCCAAAAACATTATTGACTATCGCC GCGAACATGGTGCTTTTACCTCGCGTGCCCAGCTTCTTAAAGTTCCCCGATTGGGTCCCTCAGCTTATCAGCAGTGTGCT GGATTCCTGCGTATCCACAACGCCAAGAACCCGCTTGACGGCACCGCTGTACACCCTGAGAGTTATCCTATTGTGCAGCA AATGGCCAAAGATCAGGGCTGCACCGTAGCCGACCTTATTCATAACAAGGAAAAGCGCGAAGCTCTGGAGTTGCACCGCT ACGTAACAGCCGATGTGGGTATGCCTACACTTACCGATATTATGGCCGAACTAGAAAAGCCTGGGCGCGACCCACGCCAG CAGCTTGAGGCTTTCGAATTTGACAAGAACGTTAGTACCATCGACGATTTGGTTGAGGGCATGGTGCTACCCGGTATTGT TACCAACATCACCAACTTTGGAGCCTTTGTAGATATTGGTGTGCATCACGACGGTTTGGTACACATCTCGCAAATGGCCA ACCGCCGTATTGCTCACCCACTCGACGTGGTTAAGCTTCACCAGCACGTACAAGTACGCGTAACCGAGGTTGATCACCGT CGTCAGCGCATCTCTCTGTCCATGAAAGGCCTATAG Protein sequence : MQKNVFSCQIATQLGISQKFVEATLALLDEGCTIPFIARYRKERTGGLDEVQIAAISDRYEKLLDIQKRKETVIKTITDL DKMTPELQERINQCWDATEIEDIYLPYKPKRRTRAQVAREQGLEPLALLLMKQRERDPEAAAAKFAKGDVDSVESAIKGA QDIIAEVVSENEKSRQQLRNAFTRQAVITSKVVKAKANSDEAAKYSDYFDWSEPLKRCSSHRLLAMRRGESEGILRISIS PNDDEALERLKHHYVYGNTPCGRLVAEAIDDGYKRLLKPAIETEFAAQSKEKADEEAIHVFAENLRQLLLGAPLGQKRVL GIDPGFRTGCKVVCLDAQGNLLHHDVIMPHPPVNKRTEAAITLQRLIQKFQIEAISIGNGTASRETDSFVKDVLAGKYNV AADSKSSKAKADDKNAPTPQVFVVSEAGASVYSASKVARDEFPNEDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQ HDVDQTKLKHSLDQTVESCVNLVGVDLNTASQHLLMYVSGLGATLAKNIIDYRREHGAFTSRAQLLKVPRLGPSAYQQCA GFLRIHNAKNPLDGTAVHPESYPIVQQMAKDQGCTVADLIHNKEKREALELHRYVTADVGMPTLTDIMAELEKPGRDPRQ QLEAFEFDKNVSTIDDLVEGMVLPGIVTNITNFGAFVDIGVHHDGLVHISQMANRRIAHPLDVVKLHQHVQVRVTEVDHR RQRISLSMKGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-145 | 46 |
