Gene Information

Name : PRU_0421 (PRU_0421)
Accession : YP_003573797.1
Strain : Prevotella ruminicola 23
Genome accession: NC_014033
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 510865 - 511575 bp
Length : 711 bp
Strand : -
Note : identified by match to protein family HMM PF00596

DNA sequence :
ATGTTAGAAGAACTGAAAGAAAAAGTATTCAAGGCAAATCTCGACCTTGTAAAGCAGAACCTGGTAATCTTTACCTGGGG
TAATGTCTCAGGTATCGACCGTGAAAAAGGACTTGTTGTTATCAAGCCCTCTGGTGTTGACTACGATGTAATGAAAGCCA
GCGACATGGTTGTTGTTGATCTCGAGAGTGGTAAGGTAGTCGAGGGTGATCTCAACCCTTCGTCGGATACCCCTACACAC
CTTGTATTATATAAGGCATTCCCTAACATCCAGGGCGTGGTTCACACCCACTCTACCTATGCCACAGCTTTTGCTCAGGC
AGGTCGCGATATTCCTAACATCGGCACCACTCACGCCGACTATTTCTACAAGGATATCCCTTGTACCCGCGATATGACCG
AGGCAGAGGTTAAGGGCAACTACGAGTTGGAGACTGGTAACGTGATTGTAGATGAGATTCTGAACATCCGTAAGATAAAC
CCTGATCACACGCCCGCTGTGCTGGTTAAGAACCACGGTCCATTCTCATGGGGAACCTCACCCGACAATGCCGTTTACAA
TGCCAAGGTGATGGAGCAGTGTGCCAAGATGGCTTTCGTAGCCTTCTCGGTTAATCCCAACCTCACCATGAATCCGCTGC
TGGTTGAGAAGCATTACATGCGCAAACACGGCCCCAACGCGTACTATGGCCAAAAGGGACAGAAACATTAA

Protein sequence :
MLEELKEKVFKANLDLVKQNLVIFTWGNVSGIDREKGLVVIKPSGVDYDVMKASDMVVVDLESGKVVEGDLNPSSDTPTH
LVLYKAFPNIQGVVHTHSTYATAFAQAGRDIPNIGTTHADYFYKDIPCTRDMTEAEVKGNYELETGNVIVDEILNIRKIN
PDHTPAVLVKNHGPFSWGTSPDNAVYNAKVMEQCAKMAFVAFSVNPNLTMNPLLVEKHYMRKHGPNAYYGQKGQKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-61 58