Gene Information

Name : PRU_1934 (PRU_1934)
Accession : YP_003575214.1
Strain : Prevotella ruminicola 23
Genome accession: NC_014033
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2323842 - 2324561 bp
Length : 720 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATACATTTAAAAGACATCAACAAGACCTATCAGGGTGCCCAGCCACTGCATGTGCTGAAGGGTATCTCGCTCGACAT
CGCAAAGGGTGAGTTCGTCAGCATCATGGGTGCTTCGGGCTCGGGTAAGAGCACGCTGCTTAATATCTTAGGTATTCTGG
ATAACTACGACTCAGGGAGCTACGAGCTCGCCGGAACTCCCATCTGGAACCTCTCAGAGCGTAAGGCTGCCGAGTATCGC
AACAAGATGATAGGTTTTATTTTCCAGAGCTTTAATCTCATCTCTTTCAAGACCGCCGTGGAAAACGTTGAGTTGCCATT
ATTCTACCAAGGGGTATCCAGAAAGAAGCGTCACCAGATGGCGATGGAATATCTGGATAAGCTGGGCTTGGCCGATTGGG
CCGAACATTACCCCAACGAACTGTCGGGAGGACAGAAACAGCGTGTGGCAATAGCCAGAGCACTCATCACCCGTCCACAG
ATTATCCTGGCCGATGAGCCTACAGGTGCACTCGACTCGAAGACATCTGTGGAGGTGATGCAGCTGCTGAAGAAGCTGAA
CCAAGAGGATGGCATGACCATCGTAGTGGTAACTCATGAGAGCGGTGTGGCTAATGAAACCAACAAGATTGTACATATCA
AGGATGGTGTCATAGGTCAGATAGAAGAGAATCTCGATCATAATGCTAGTCCTTTTGGCAGCGGAGGTTTAATGAAGTAG

Protein sequence : 
MIHLKDINKTYQGAQPLHVLKGISLDIAKGEFVSIMGASGSGKSTLLNILGILDNYDSGSYELAGTPIWNLSERKAAEYR
NKMIGFIFQSFNLISFKTAVENVELPLFYQGVSRKKRHQMAMEYLDKLGLADWAEHYPNELSGGQKQRVAIARALITRPQ
IILADEPTGALDSKTSVEVMQLLKKLNQEDGMTIVVVTHESGVANETNKIVHIKDGVIGQIEENLDHNASPFGSGGLMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-37 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-39 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-39 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-39 46
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PRU_1934 YP_003575214.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-56 54
PRU_1934 YP_003575214.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-37 47
PRU_1934 YP_003575214.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-41 47
PRU_1934 YP_003575214.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-41 44