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Name : kdsB (PRU_1308) Accession : YP_003574622.1 Strain : Prevotella ruminicola 23 Genome accession: NC_014033 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1558483 - 1559229 bp Length : 747 bp Strand : + Note : identified by similarity to SP:P42216; match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : ATGAAGTTTATGGCTATTATTCCTGCCCGTTATGCTTCTACAAGATATCCGGGCAAACCGCTTGCAATACTGGGCGGAAA ATCAGTGATTCAGAGAGTGTATGAGCAGGTGAAGAGCGTGCTCGACGAAGTATATGTAGCAACCGACGACCAGCGTATTT TCGACGCTGTAACAGCATTTGGTGGCCAAGCAGTGATGACCCGTGCCGACCATAAGAGTGGTACCGACCGCATCGAAGAG GCTGCCGAGAAAATCGGCTCGGATGCTGATGTAATCATCAATGTACAGGGCGACGAACCATTTATCCAGCCCTCGCAGAT TGAAACCTTGATGCACCTTTTTGATGCACCAGAGACTCAGATTGGTACATTGGGAAAGTTGTTCGAATCGATCGAAGCAA TAGAGAATCCCAATTCGCCAAAGATTGTGACCGACAATCGCGGATTTGCACTCTACTTTAGTCGTAGTGTGATACCTTAT ATCCGAGGCAAGGAGCGTAACGAGTGGTTTGGCGAATACCCATTCCTGAAACACTTGGGAATCTACGCTTATCGCCGTGA GGTTTTGGCCGAAGTAACAAAATTGCCCCAAAGCAGTCTGGAAAAAGCAGAGAGCCTGGAGCAATTACGTTGGTTACAGA ACGGCTACCGCATCCGTGTGGGCATGACCGATATCGAAACTGTTGGTATCGACACCCCAGAGGATCTGACCCGCGCCGAA GAATTCTTACTGAAGCATCTGGCGTAA Protein sequence : MKFMAIIPARYASTRYPGKPLAILGGKSVIQRVYEQVKSVLDEVYVATDDQRIFDAVTAFGGQAVMTRADHKSGTDRIEE AAEKIGSDADVIINVQGDEPFIQPSQIETLMHLFDAPETQIGTLGKLFESIEAIENPNSPKIVTDNRGFALYFSRSVIPY IRGKERNEWFGEYPFLKHLGIYAYRREVLAEVTKLPQSSLEKAESLEQLRWLQNGYRIRVGMTDIETVGIDTPEDLTRAE EFLLKHLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-45 | 48 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-45 | 48 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-45 | 48 |
