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Name : clpB (PRU_0121) Accession : YP_003573523.1 Strain : Prevotella ruminicola 23 Genome accession: NC_014033 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 149429 - 151939 bp Length : 2511 bp Strand : - Note : identified by similarity to SP:P53533; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGACATTCGACAAGTTTACAATTAAAGCACAAGAGGCCATTCAGCAGGCGGTGAACGCGGCCCAGATGAATGGTCAGCA GGTGATAGAACCTGTACACATACTGAAAGGTGTGATAGAGAAGGCGAAGGATGTAACCACCTTCATCTTCCAGAAGTTGG GTGTAAATGCCCAGCAGATAGAGTTACTGGTAGATCAGGAGATACAGCATCTGCCCAAAGTACAGGGTGCTGGTCAGCCT TATCTCTCCAGTGATAGTAATAATGTACTCGTGCGCGCGCAAGAGGTAGCCCAGAAAGGTGGCGACGAGTTTGTATCGGT AGAACCTATCCTACTCGCCCTGCTGAAAGTTAATTCTACTGCCTCGCGCATCATGAAGGATGCCGGCTGTACCGAGAAGG ATATGCAGGCGGCTATCCAGGAGCTGCGCCAGGGACAGAAGGTGCAATCGCAGAGTGCCGATGATAACTACCAGAGCTTG GAGAAATATGCCAAGAACCTGGTGGATTTGGCCCGCCAAGGCAAGCTGGACCCAGTGATTGGTCGCGACGATGAGATTCG TCGTGTACTGCAGATTCTGAGTCGCCGCACCAAGAACAACCCTATATTAATAGGTGAACCTGGTACAGGTAAAACAGCCA TCGTTGAGGGACTGGCTGGTCGTATTGTGCGTGGCGATGTGCCCGAGAACCTGAAGGACAAGCAACTCTACTCGCTGGAT ATGGGTGCACTGGTAGCAGGTGCCAAGTACAAAGGTGAGTTTGAGGAGCGCCTGAAGAGTGTGATCAACGAGGTGACCAA GGCCGAGGGCCGCATCATCCTGTTTATCGACGAGATCCACACCTTGGTAGGTGCAGGTGGTGGCGAGGGCGCCATGGATG CAGCCAACATTCTGAAACCTGCCCTGGCACGTGGTGAACTGCGTGCCATAGGTGCCACCACGCTGAACGAGTATCAGAAA TACTTTGAGAAGGATAAGGCCCTGGAGCGCCGATTCCAGACCGTGATGGTAGATGAGCCCGATGAACTGAGTGCTATCAG CATTCTGCGAGGCTTGAAGGAACGTTACGAGAACCACCACAAGGTACGTATCCAGGACGATGCCTGTATCGCTGCCGTGC AACTCTCAGAGCGCTATATCTCTGAAAGATTCCTCCCCGACAAGGCCATCGACCTGATGGACGAGGCCGCAGCAAAACTG CGCATGGAGCGCGACTCGGTACCTGAGGAGTTGGATGAGATTACCCGCCGACTGGCTCAGCTCGAAATCGAGCGTGAGGC TATCAAAAGAGAGGGCGACACCCAGAAGATAGCACAGTTGGATAAGGACATCGCCGAACTGAAGGAACAGGAAACCCAGT TCCGTGCCAAGTGGGAAGGCGAGCGCCAACTCATCAACAAAATCCAACAGGACAAGCAGGATATTGAGAACCTGAAGCTG GAGGCAGAACGTGCCGAGCGCGAGGGCGACTACGGCAAGGTAGCCGAGATACGCTACTCGAAACTGAAAGCACTTGAGGA CGACATTGCACATATCCAGAGTCAGCTGGCCAATGCCCAAGGCGATAACTCTCTGGTTCGCGAAGAGGTTACCGCCGATG ACATCGCCGAGGTAGTAAGCCGCTGGACAGGTATCCCCGTAACCAAGATGATGCAGAGCGAGCGCGAAAAGCTGTTGCAC TTAGAGAATGAGTTGCACAAGCGTGTGATTGGTCAGGACGAAGCCATCATTGCCGTATCTGATGCTGTGCGCCGTAGTCG TGCTGGCTTGCAGGATCCCAAGCGTCCTATCGCCAGCTTCATCTTCCTTGGTACCACAGGTGTAGGTAAAACAGAGCTTG CCAAAACCCTGGCCGACTATCTGTTTAACGACGAGACCATGATGACGCGTATCGACATGAGCGAGTATCAGGAGAAATAC AGCGTGAGCCGACTGATTGGTGCGCCTCCAGGATACGTAGGCTACGACGAGGGTGGACAACTGACCGAGGCCGTGCGCCG CAAGCCTTACTCGGTAGTGCTGTTCGATGAGATTGAGAAGGCCCATCCGGATGTGTTCAACATTCTGTTGCAGGTGCTGG ACGATGGACGTTTGACGGACAACAAGGGACGTACCGCCAACTTCAAGAACACCATCATTATCATGACCTCGAACGCCACC CGTGAGCAACTCAGAGCCACTATGCGCCCAGAGTTCCTGAACCGTATTGATGAGATTATCACCTTTACACCTCTTACCAA GGAACAGATTGCCGACGTAGTGAAGTTGCAGATGAAGAAGGTTACCGATATGCTGGCACCTCAGGGCATCACCTTAGAGT GTACACCACAGGCCATCGACTATCTGGCCGAGCAGGGTTACGATCCCGACTATGGTGCTCGTCCTGTAAAGCGTGCCATC CAGCAGTTCGTGCTCAACGACCTGTCGAAGAAGATCCTGTCGGATGAGGTGGATCGCACCAAACCTATCATCATCGATGA ATACGGCGAAGGACTGATTTTTAGAAACTAA Protein sequence : MTFDKFTIKAQEAIQQAVNAAQMNGQQVIEPVHILKGVIEKAKDVTTFIFQKLGVNAQQIELLVDQEIQHLPKVQGAGQP YLSSDSNNVLVRAQEVAQKGGDEFVSVEPILLALLKVNSTASRIMKDAGCTEKDMQAAIQELRQGQKVQSQSADDNYQSL EKYAKNLVDLARQGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAGRIVRGDVPENLKDKQLYSLD MGALVAGAKYKGEFEERLKSVINEVTKAEGRIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQK YFEKDKALERRFQTVMVDEPDELSAISILRGLKERYENHHKVRIQDDACIAAVQLSERYISERFLPDKAIDLMDEAAAKL RMERDSVPEELDEITRRLAQLEIEREAIKREGDTQKIAQLDKDIAELKEQETQFRAKWEGERQLINKIQQDKQDIENLKL EAERAEREGDYGKVAEIRYSKLKALEDDIAHIQSQLANAQGDNSLVREEVTADDIAEVVSRWTGIPVTKMMQSEREKLLH LENELHKRVIGQDEAIIAVSDAVRRSRAGLQDPKRPIASFIFLGTTGVGKTELAKTLADYLFNDETMMTRIDMSEYQEKY SVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTANFKNTIIIMTSNAT REQLRATMRPEFLNRIDEIITFTPLTKEQIADVVKLQMKKVTDMLAPQGITLECTPQAIDYLAEQGYDPDYGARPVKRAI QQFVLNDLSKKILSDEVDRTKPIIIDEYGEGLIFRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-97 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-97 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003573523.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 4e-118 | 43 |
| clpB | YP_003573523.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 4e-100 | 43 |
