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Name : nifJ (PRU_1235) Accession : YP_003574550.1 Strain : Prevotella ruminicola 23 Genome accession: NC_014033 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1463288 - 1466863 bp Length : 3576 bp Strand : + Note : identified by similarity to GB:CAA70873.1; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02175; match to protein family HMM TIGR02176 DNA sequence : ATGGCTAAAGAAAAGAAGTTTATCACCTGTGATGGTAACGAGGCTGCAGCTCATGTGAGCTATATGTTCTCGGAGGTAGC TGCTATCTACCCCATCACCCCGTCTTCGCCAATGGCGGAGCATGTTGACGAGTGGGCTGCACGTGGTCGTAAGAACCTGT GGGGCCAGAACGTCTCAGTTCAGGAAATGCAGTCAGAGGCTGGTGCTGCCGGTGCCGTTCACGGTTCGCTGCAGGCTGGT GCTCTCACCACTACATTCACCGCATCTCAGGGCTTGCTCCTGATGATCCCTAACATGTACAAGATTGCTGGTGAGTTGAT TCCTTGCGTATTCGACGTATCTGCCCGTACGCTGGCTTCACACTCTCTGTGTATCTTTGGCGACCACCAGGACGTAATGG CTTGCCGTCAGACCGGTTTTGCTATGTTCTGCTCAGGTTCAGTTCAGGAGGTTATGGACCTTACCGCTGTTCCTCACCTG GCTACCCTCGAGACTATGGTTCCATTCGTAAACTTCTTCGATGGTTTCCGTACCTCTCACGAGTATCACAAGATTGAGAT GATGGACATGGAGGATATCCGTCCTCTGGTTAAGGAAGAGTACATCAAGCGTTTCCGCGATCGTGCTATGAGCCCTGAGC GCCCTGTAACACGCGGTACCGCCGAGAACCCCGAGACCTTCTTCACACACCGCGAGGCTAGCAATCCTTACTACGATGCA GTACCCGAGGTAGTAGAGAAGTACCTGGGCGAGATCTCTAAGATCACCGGCCGTGAGTACCACCTGTTCTCATACTACGG AGCCGAGGATGCCGATCGTATCATCATCCTGATGGGTTCGGCTACCGATGCAGCTCGCGAGGCTATCGACTACCTGAACG CAAACGGTCAGAAGGTTGGTATGATCTCAGTTCACCTGTATCGTCCATTCTCAGTTAAGCACCTGCTGGCTGCTGTTCCT AAGACAGTTAAGAAGATTGCCGTTCTGGATCGTACTAAGGAGCCAGGCGCTAACGGCGAGCCTCTGTACCTCGACGTGAA GGATGCCTTCTACGATGTTCAGGATCGTCCAGTTATCGTTGGCGGTCGCTACGGTCTTGGTAGCCGCGACACCACACCTG CTCAGATCATCAGCGTGTTCAACAACCTCGCTATGCCCGAGCCAAAGAACCACTTCACAGTTGGTATCGTAGACGATGTT ACCTTCACCTCTCTGCCTGAGGTTGAGGAGATTGCCCTGGGTGGTGCTGGCATGTTCCAGGCTAAGTTCTACGGTCTGGG TGCCGATGGTACCGTAGGTGCTAACAAGAACTCAGTTAAGATTATTGGTGACAACACCGACAAGTACTGCCAGGCTTACT TCTCTTACGACTCTAAGAAGTCGGGAGGTTTCACCTGCTCTCACCTGCGTTTCGGTGATACACCTATCCGCTCTACCTAC CTGGTAACTACACCTAACTTCGTAGCTTGCCACGTTCAGGCTTACCTGCACATGTACGATGTTACACGTGGTTTGCAGAA GAACGGTCAGTTCCTGCTGAACACTATCTTCGACGCCGACGAGCTCGAGAAGTTCATGCCTAACAAGGTAAAGCGTTACT TCGCACAGAACAACATTACTGTTTATACCATCAACGCTACTAAGATTGCTCAGGAGATTGGTCTGGGTAACCGTACCAAC ACTATCCTGCAGAGTGCCTTCTTCCGTATTACAGGCGTAATCCCCGTAGAGCTGGCTGTTGAGAAGATGAAGGCTGCTGC CTTGAAGTCTTACGGAGCTAAGGGTCAGGATGTTGTAGATAAGAACTATGCCGCTATCGATCGTGGTGGTGAGTATGTTC AGCTCACAGTTAAGCCTGAGTGGGCTAACCTGGCTGACGACGCTGAGAAGCAGGACGATGCACCCGCATTCGTTAAGGAG CTGGTTCGTCCTATCAACGCACAGGCCGGTGACTTGCTGAAGGTTTCTGACTTCGTTAAGCACAACACCGTCGACGGTTC TTGGGAGGTTGGTACAGCCGCTTACGAGAAGCGTGGTGTTGAGGCCTTCGTTCCTGTTTGGAACAAGGACAACTGTATCC AGTGTAACCAGTGTGCTTACATCTGTCCTCACGCTGCTATCCGTCCATTCGTTCTCGACGACGAGGAGCTGAAGGGCTTC GCAGCTGCTGCTGATACTCTCGAGATGAAGGCTCCTGCCGCTATGAAGGGCATGCACTTCCGCATCGAGACTTCAGTACT CGACTGTCTGGGTTGCGGTAACTGTGCTGATATCTGCCCAGGCAATCCTAAGACTGGTAAGGCTCTTACCATGGCTCCAT TCAATCCTGATGCTGCCGATATGGTTCAGGAGGCTAAGAACTGGGAGTACCTGGTTAAGAACGTTAAGAGCAAGCAGAAC CTGGTTGACATCAAGAGCAATGTTAAGAACTCACAGTTCGCTCAGCCTCTGTTCGAGTTCTCTGGCGCTTGCTCTGGTTG CGGTGAGACTCCATACGTTAAGCTGATTTCTCAGCTGTTCGGTGATCGTCAGATGATTGCCAACGCTACTGGATGTTCTT CAATCTACTCTGCTTCTATTCCTTCTACACCTTACACCAAGAACGAGAAGGGTCAGGGTCCTGTATTCAACAACTCTCTG TTCGAGGACTTCTGCGAGTTCGGTCTGGGTATGGCTCTTGGTAACAAGAAGATGAAGGAGCGCGTAGCTAAGCTGCTGCA GGAGATGATCGACGGCAACGCCAGCGACGAGTACAAGGCACTTGCTCAGGAGTGGATTGCTAATCAGGACGACGCTGAGA AGACTAAGGAGATTGCTCCAAAGCTTCGTGCTTGCATCGCCGAGAGCGCTGCTAAGGGCTGCCCAGTTTGCAAGGAGCTC CAGACTCTGGATCACTACCTGGTTAAGCGTTCACAGTGGATCATCGGTGGTGACGGTGCCTCTTACGACATCGGTTACGG CGGTCTCGACCACGTGATTGCTTCTGGCGAGGATGTTAACATCCTGGTACTCGATACCGAGGTTTACTCTAACACCGGTG GTCAGGCTTCTAAGGCTACTCCTCTTGGTGCTATCGCACAGTTCGCTGCTCAGGGTAAGCGCATCCGCAAGAAGGATCTG GGTATGATTGCTACCACTTATGGTTATGTATATGTAGCTCAGATTGCTATGGGCGCCGACCACGCACAGACCCTCAAGGC TATCCGCGAGGCTGAGGCTTGGCACGGACCTTCAATCATCATCGCCTACGCTCCATGTATCAACCACGGCTTGAAGGCCA AGGGCGGTATGGGTAAGAGCCAGGCCGAGGAGAAGAAGGCTGTTGAGTGCGGTTACTGGCACCTGTGGCGTTTCAACCCA GCTCTGGCTGAGGAAGGCAAGAACCCATTCTCTCTCGACTCTAAGGAGCCTAACTGGGAGAACTTCCACGACTTCCTGCT TGGCGAGGTTCGCTACCTGAGTGTTAAGAAGGCTTATCCTAACGAGGCCGAGGAGCTCTTCGCTGAGGCTCAGCGCATGG CTCAGCTCCGTTACAAGTCTTACATCCGTAAGAGCCAGGAGAATTGGGAGGACTAA Protein sequence : MAKEKKFITCDGNEAAAHVSYMFSEVAAIYPITPSSPMAEHVDEWAARGRKNLWGQNVSVQEMQSEAGAAGAVHGSLQAG ALTTTFTASQGLLLMIPNMYKIAGELIPCVFDVSARTLASHSLCIFGDHQDVMACRQTGFAMFCSGSVQEVMDLTAVPHL ATLETMVPFVNFFDGFRTSHEYHKIEMMDMEDIRPLVKEEYIKRFRDRAMSPERPVTRGTAENPETFFTHREASNPYYDA VPEVVEKYLGEISKITGREYHLFSYYGAEDADRIIILMGSATDAAREAIDYLNANGQKVGMISVHLYRPFSVKHLLAAVP KTVKKIAVLDRTKEPGANGEPLYLDVKDAFYDVQDRPVIVGGRYGLGSRDTTPAQIISVFNNLAMPEPKNHFTVGIVDDV TFTSLPEVEEIALGGAGMFQAKFYGLGADGTVGANKNSVKIIGDNTDKYCQAYFSYDSKKSGGFTCSHLRFGDTPIRSTY LVTTPNFVACHVQAYLHMYDVTRGLQKNGQFLLNTIFDADELEKFMPNKVKRYFAQNNITVYTINATKIAQEIGLGNRTN TILQSAFFRITGVIPVELAVEKMKAAALKSYGAKGQDVVDKNYAAIDRGGEYVQLTVKPEWANLADDAEKQDDAPAFVKE LVRPINAQAGDLLKVSDFVKHNTVDGSWEVGTAAYEKRGVEAFVPVWNKDNCIQCNQCAYICPHAAIRPFVLDDEELKGF AAAADTLEMKAPAAMKGMHFRIETSVLDCLGCGNCADICPGNPKTGKALTMAPFNPDAADMVQEAKNWEYLVKNVKSKQN LVDIKSNVKNSQFAQPLFEFSGACSGCGETPYVKLISQLFGDRQMIANATGCSSIYSASIPSTPYTKNEKGQGPVFNNSL FEDFCEFGLGMALGNKKMKERVAKLLQEMIDGNASDEYKALAQEWIANQDDAEKTKEIAPKLRACIAESAAKGCPVCKEL QTLDHYLVKRSQWIIGGDGASYDIGYGGLDHVIASGEDVNILVLDTEVYSNTGGQASKATPLGAIAQFAAQGKRIRKKDL GMIATTYGYVYVAQIAMGADHAQTLKAIREAEAWHGPSIIIAYAPCINHGLKAKGGMGKSQAEEKKAVECGYWHLWRFNP ALAEEGKNPFSLDSKEPNWENFHDFLLGEVRYLSVKKAYPNEAEELFAEAQRMAQLRYKSYIRKSQENWED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 55 |
