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Name : acrB (SRM_00092) Accession : YP_003569965.1 Strain : Salinibacter ruber M8 Genome accession: NC_014032 Putative virulence/resistance : Resistance Product : cation/multidrug efflux pump AcrB Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 101815 - 104865 bp Length : 3051 bp Strand : + Note : - DNA sequence : ATGGACATCGCCAAGGCCGCCATCGAGAACCGGACGCTGACGTACGTCACCACGTTGCTCGTGGTGGTGGGGGGCGTCAT TGCGTTCCTGAACCTGGGGCGCCTGGAGGACCCGGAGTTTACCATTAAGCGCGCCCTGGTGGTGACCCAGTACCCGGGGG CGACCGCCCACGAGGTGGAGGCGGAGGTGTCCGACCCCATCGAGGAGGCCGTTCAGGCAATGGGAAAGGTGAAGGAGATC AAGTCCCGCTCCAGCCGGGGGCGCTCGACTTTGGAGGTCGAGATGAAGAGCGACGTCATCGGGGATGCGGTGACGCAGGC CTTCGACGACCTGCGCGACAAGGTCAACGACGCTCAGGGACGCCTGCCGCCCGGGGCGGGCCCGTCCGTCGTGGAGGACG ACTTTGGGGACGTGTACGGCATCTTTATGGCCATTACCGGGGAGGGCTACAGCAAGCAGGAGCTGAAGGACCACGCGGAG GCCCTGAAGCGGGAGCTGGTGCAGGTGCAGGGCGTCGCGAAAGTTCGCCTTTTTGCGGACCGACAGGAGACCATCTACGT CGAGCCGAACCGCGACCGGTTGTCGAACCTGGGGATCAGTGTCGACCGGATCGCGGGAAGGCTGCGCACACAGAACACTG TCGTTGATGCCGGGCGCGTGCGGGTGGGGGACAGCCACATTTCGGTCCGGCCGTCGGGGGCAACGGCGTCGCTGGACGAC CTGCGGTCGATTCTGATCGCGAGTCAGGGGGGACGCCAAATCTTCCTGGAGGACATCGCCACGGTGCGGCGCGGCTACGC CGCCCCGCCCCGGGCCCTCATGCGGTACGACGGCGAGCCGGCAATCGGCCTCGGCGTATCGACCGTCGACGGGGGCAACG TCGTTACGATGGGACGGGCCGTGAAGGCCCGCCTCGATGAATTGAAGGCCGATCGCCCCGTGGGCATCGAGTACAACTAC ATCAACTTCCAGGCCGAGGACGTGAGCGAGGCGGTGAGTGGCTTTGTCTGGAACCTGGTCACCGCCATCGCGATCGTGAT CGTCGTGCTGCTGCTGGCGATGGGGTGGCGCAGCGGGCTCCTCATGGGGTTTGTGCTGGCGGTGACCGTGCTCGGCACGT TTATCCTGATGTACGCGACGGACGTGGTGCTGCAGCGGATCTCGCTGGGCGCGCTCATCATCGCGCTCGGGATGCTCGTC GACAACGCCGTGGTGATCGTGGACGGCATCCTGACGCGCCTCAAGGAGGGGCGGGAGCGGGTGGAGGCCGCGTCGGAGAT TGTGGAGCAGACGAAGTGGCCGCTCTTCGGGGCCACGGCCGTGGCCATCCTGGGCTTCGCCGCCATCGGGACCTCCTCCG ACAGCAGCGGGGAGTTTTTGGGGTCGTTGTTCCTCGTGATCCTCTACTCGCTGTCTCTGAGCTGGGTGCTCTCCGTTACG CTCGCGCCGCTCCTGGGGGTTGACTTTCTGAAGAAGCCCGACCCGGACGAGGCGGTGGAGAGCGCCCACGACGGGCCGGT CTACACTGTGTACCGGCGCCTGCTTCAGGGCGCGATCAACTACCGGTGGGTGACGGTGGCGGTCATCACGGTGCTCATGG GGCTGTCGATCTGGGGGAGCGGGTTCGTCAAGCAGAGCTTCTTTCCCGACTCCACGCGGCCGCAGTTTCTCGTGGACGTG TGGATGCCCCAGGGCACGCACATTCGGGACACTGAGGATGCCGTCAAGGAGGCGGAGCAGTATGTGCAGGGCCTCGACGC CGTCACCCACGTCAGTTCGGTGGTGGGGCAGGGGGCGCTCCGGTTCGTGCTGCCGTACAGCCCGGAGCGGCCCAACTCGT CCTACGCCCAGCTGATCGTGGACGTCGACGACTGGCGGACGATTTCCAGTCTCAAAGACTCGGTGGACGCCCGCCTCTCC GCGATGCTGCCGCGGGCCAACGTGTACGCGTTTCCGTTTGTCTTCGGGCCCGGGGGCGGCACCGGGCGCATTCAGGCGCG CATCAGCGGCCCCAACCCCGACTCGCTGCGGGCCATCGCCCAGCGCGTGGAGGGCATCTTTCGGGCGCACGACAACACCA AGGCCGTCCGCAACGACTGGCGCAACCGGGTGGAGGTCACCCGCCCCCAGGTCGCCGAGGACGCGGCGAGTGCCCTTGGG GTGACGCGCCCCGACGTGGCCCGCGCCGTTCAGCGGACCTTTGAGGGCACCCGCATGGGGGTGTACCGAAGAGGGGAGGA CCTGCTGCCCATCATGATGCGGGCCCCGTCCGAGGAGCGGGCCCGCGCCAGCAACATGAAAAACGCGCAGGTGTGGAGTC CCGTGGCGGGCGCGTACGTCCCGATCCGGCAGGTCGTCTCCGGGTTCGAGACCGGCTTCGAGGACGGCATTGTGTGGCGG TACAAGCGCGCCCCGACGGTGAGCGTGTACGCCGACCCCATCTCGGGGACGGCGACCTCGGTCTTCCAGCAGGTGCGCCC GACGGTGGAGAAGCTCTCGCTTCCGCGAGGGTACGACATCGAATGGGGCGGCCAGTACGAGAACTCGAACGAGGCCAATG CCTCGCTCTTCTCGGCGGTCCCGATTTTCTTCGTGCTGATGGTGCTGATCACGGTGGCACTCTTCAACGCGCTCCGCCAG CCGCTCATCATCTGGCTGACCGTGCCCCTGGCCCTGATCGGCGTGGTGGCGGGCCTGCTCGCCACGGGGGCGGCCTTCGG GTTTACGGCCCTGCTGGGCTTCCTGAGCCTGTCGGGCCTGCTCATCAAGAATGCCGTCGTCGTGATCGACGAGATCGAGA TCTGGAAGCAGGACGAATCGCTCTACCAGGCCATCGTGGGCGCGAGCGTCGTCCGGCTGCGCCCGGTCATGATGGCGTCG ATTACGACGGCCCTGGGCATGATTCCGCTCTTTACCGACGCGTTCTTCGTGGCCATGGCGGTGACCATCACGTCCGGGCT GCTCTTCGCCACGGTGCTCACAATGATCGTGGTACCGGTCCTCTACGCCATCCTCTTTGGCGTCGAGCGCCTCCCGTATT CGGAACGCTAG Protein sequence : MDIAKAAIENRTLTYVTTLLVVVGGVIAFLNLGRLEDPEFTIKRALVVTQYPGATAHEVEAEVSDPIEEAVQAMGKVKEI KSRSSRGRSTLEVEMKSDVIGDAVTQAFDDLRDKVNDAQGRLPPGAGPSVVEDDFGDVYGIFMAITGEGYSKQELKDHAE ALKRELVQVQGVAKVRLFADRQETIYVEPNRDRLSNLGISVDRIAGRLRTQNTVVDAGRVRVGDSHISVRPSGATASLDD LRSILIASQGGRQIFLEDIATVRRGYAAPPRALMRYDGEPAIGLGVSTVDGGNVVTMGRAVKARLDELKADRPVGIEYNY INFQAEDVSEAVSGFVWNLVTAIAIVIVVLLLAMGWRSGLLMGFVLAVTVLGTFILMYATDVVLQRISLGALIIALGMLV DNAVVIVDGILTRLKEGRERVEAASEIVEQTKWPLFGATAVAILGFAAIGTSSDSSGEFLGSLFLVILYSLSLSWVLSVT LAPLLGVDFLKKPDPDEAVESAHDGPVYTVYRRLLQGAINYRWVTVAVITVLMGLSIWGSGFVKQSFFPDSTRPQFLVDV WMPQGTHIRDTEDAVKEAEQYVQGLDAVTHVSSVVGQGALRFVLPYSPERPNSSYAQLIVDVDDWRTISSLKDSVDARLS AMLPRANVYAFPFVFGPGGGTGRIQARISGPNPDSLRAIAQRVEGIFRAHDNTKAVRNDWRNRVEVTRPQVAEDAASALG VTRPDVARAVQRTFEGTRMGVYRRGEDLLPIMMRAPSEERARASNMKNAQVWSPVAGAYVPIRQVVSGFETGFEDGIVWR YKRAPTVSVYADPISGTATSVFQQVRPTVEKLSLPRGYDIEWGGQYENSNEANASLFSAVPIFFVLMVLITVALFNALRQ PLIIWLTVPLALIGVVAGLLATGAAFGFTALLGFLSLSGLLIKNAVVVIDEIEIWKQDESLYQAIVGASVVRLRPVMMAS ITTALGMIPLFTDAFFVAMAVTITSGLLFATVLTMIVVPVLYAILFGVERLPYSER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| acrB | YP_003569965.1 | cation/multidrug efflux pump AcrB | BAC0428 | Protein | 5e-178 | 47 |
| acrB | YP_003569965.1 | cation/multidrug efflux pump AcrB | BAC0519 | Protein | 0.0 | 47 |
| acrB | YP_003569965.1 | cation/multidrug efflux pump AcrB | BAC0425 | Protein | 0.0 | 46 |
| acrB | YP_003569965.1 | cation/multidrug efflux pump AcrB | BAC0526 | Protein | 4e-180 | 44 |
