Gene Information

Name : lolD (SRM_01525)
Accession : YP_003571398.1
Strain : Salinibacter ruber M8
Genome accession: NC_014032
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1740570 - 1741433 bp
Length : 864 bp
Strand : -
Note : -

DNA sequence : 
TTGGACTTCGTCTCGTTGGCGGTTAGGCGCGAAGATTCTGGAGAGAGGCCCTCCCCTCGGAACGGCCCCCTCCATCCTCG
GCGTTGGGTTTTTGGCCCTGGGTCTCATCCCTGCCGCCAAGCCTCATTCCGACCGCCGCCCGCCCGTATGCCCGACGCCT
CGTCGCCCCTCGTCCAGCTCGACGCCCTCACGAAGACCTACCGTGAGGGGGAGCAGGACCGCACGGTGCTTCAGGAGGTC
TCGTTGCGTCTGGAACGGGGCGACTTCTCGGTGCTCATGGGGCGGAGCGGGGCCGGGAAGAGCACGCTCCTCAACCTGAT
CAGCGGCATCGATCAGCCCACGTCCGGCCGCGTGCAGATTGGCGACACCGACCTCACCGGCAAGTCCGAGACAGAACGCA
CACGCTTTCGCCGCTCTCACGTGGGGTTTGTGTTTCAGTCGTTCAACCTGATCTCGACCCTCACGGTCGGGGAGAACGTG
CGGCTGCCCCTCGAGCTGGCCGGCGAGCCCCCCCGGGCCACGAAGGACCGGGCCCGGGCGATGCTGGACCGGGTCGGGCT
GGCCGACCGGGCCGACCAGTTCCCCGACCGCCTCTCCGGCGGGGAGCAGCAGCGGGTGGCCGTCGCCCGGGCCCTGGCCC
ACGAGCCCCTCCTCGTTCTCGCCGACGAACCGACGGGCAACCTGGACTACGACACGGGACAGGCGGTGCTCACCCTCCTC
AGTGACCTCGTGGTCGATACCGATACCACCCTCCTCGTGGCCACGCACGACCCGGAGGTGGTTCCCCGGGCCGACCGGGT
CCTGCACCTCCACGGCGGCTCCCTGCACGAAGAGGTGCCCGAATACATCACGTCGGGGACGTAG

Protein sequence : 
MDFVSLAVRREDSGERPSPRNGPLHPRRWVFGPGSHPCRQASFRPPPARMPDASSPLVQLDALTKTYREGEQDRTVLQEV
SLRLERGDFSVLMGRSGAGKSTLLNLISGIDQPTSGRVQIGDTDLTGKSETERTRFRRSHVGFVFQSFNLISTLTVGENV
RLPLELAGEPPRATKDRARAMLDRVGLADRADQFPDRLSGGEQQRVAVARALAHEPLLVLADEPTGNLDYDTGQAVLTLL
SDLVVDTDTTLLVATHDPEVVPRADRVLHLHGGSLHEEVPEYITSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003571398.1 lipoprotein releasing system ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-31 44
lolD YP_003571398.1 lipoprotein releasing system ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-36 43
lolD YP_003571398.1 lipoprotein releasing system ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-33 41